RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TMEM202A6NGA9 273 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SLC16A5O15375 505 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PCDH7O60245 1069 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PRAMEF2O60811 474 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 MED6O75586 246 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 IGSF6O95976 241 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L2P0CJ85 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L3P0CJ86 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L4P0CJ87 422 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L5P0CJ88 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L6P0CJ89 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4L7P0CJ90 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CDH12P55289 794 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PTGES3Q15185 160 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 SYTL3Q4VX76 610 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 OR2G6Q5TZ20 316 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 LIPJQ5W064 366 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ZNF660Q6AZW8 331 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 NHLRC1Q6VVB1 395 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CAMKMTQ7Z624 323 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 GPR135Q8IZ08 494 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 NAGSQ8N159 534 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 TOMM5Q8N4H5 51 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 OR4Q3Q8NH05 313 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SKA2Q8WVK7 121 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 SOSTQ9BQB4 213 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ATG101Q9BSB4 218 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DOHHQ9BU89 302 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUSP26Q9BV47 211 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 TBC1D17Q9HA65 648 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CRLF2Q9HC73 371 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CA10Q9NS85 328 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DUX4Q9UBX2 424 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 GSTK1Q9Y2Q3 226 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 AP1M2Q9Y6Q5 423 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 A0A0A6YYC8 382 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 C2orf92A0A1B0GVN3 265 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 I3L1I5 382 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 ZNF593O00488 134 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 UGDHO60701 494 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ATP1B2P14415 290 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 PCGF2P35227 344 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SLC1A3P43003 542 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PPIGQ13427 754 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■□□□ 13.6
UBR1-202ENST00000546274 DOC2AQ14183 400 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 KRT33BQ14525 404 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CCSMST1Q4G0I0 132 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 COX20Q5RI15 118 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 OR4A15Q8NGL6 344 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ING5Q8WYH8 240 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CPNE2Q96FN4 548 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 TEFMQ96QE5 360 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 ATF6BQ99941 703 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 CHRDQ9H2X0 955 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 C2orf42Q9NWW7 574 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 RNF215Q9Y6U7 377 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 LRRK1Q38SD2 2015 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SUV39H1O43463 412 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 LILRB5O75023 590 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ZNF44P15621 663 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PPP3CBP16298 524 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ACHEP22303 614 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 IDSP22304 550 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 AHCYP23526 432 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PBLDP30039 288 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 AKR1C3P42330 323 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SPINT3P49223 89 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PSMA6P60900 246 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 SELENOWP63302 87 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ILKQ13418 452 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 ZNF385BQ569K4 471 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 XKR6Q5GH73 641 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 TEX30Q5JUR7 227 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 PLEKHS1Q5SXH7 462 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 C18orf63Q68DL7 685 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 MZT2AQ6P582 158 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 RTL10Q7L3V2 364 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 SIAH3Q8IW03 269 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 LGI4Q8N135 537 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 DMBX1Q8NFW5 382 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 OR5J2Q8NH18 312 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 MARS2Q96GW9 593 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 IGSF21Q96ID5 467 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 POLDIP3Q9BY77 421 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 LMAN2LQ9H0V9 348 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 OR10A4Q9H209 315 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 TMEM231Q9H6L2 316 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 EXOSC3Q9NQT5 275 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 ACSS1Q9NUB1 689 aaPredicted RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 ZNF69Q9UC07 566 aa7.35□□□□□ -1.23
UBR1-202ENST00000546274 RUVBL1Q9Y265 456 aaKnown RBP7.35□□□□□ -1.23
UBR1-202ENST00000546274 TMEM218A2RU14 115 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 H0YIV9 168 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 CACNB4O00305 520 aaPredicted RBP7.34□□□□□ -1.23
UBR1-202ENST00000546274 PHYHO14832 338 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 OPN1SWP03999 348 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 CTSAP10619 480 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 OR1E2P47887 323 aa7.34□□□□□ -1.23
UBR1-202ENST00000546274 ANXA11P50995 505 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms