RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TOR2AQ5JU69 321 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 IDNKQ5T6J7 187 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PGBD2Q6P3X8 592 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ERMP1Q7Z2K6 904 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF610Q8N9Z0 462 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FAM83FQ8NEG4 500 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PTERQ96BW5 349 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SCGB3A2Q96PL1 93 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF442Q9H7R0 627 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 POLE3Q9NRF9 147 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 WNT16Q9UBV4 365 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 K7ESM1 405 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 E2F3O00716 465 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ARPC2O15144 300 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 CD36P16671 472 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 DLSTP36957 453 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 OR1D5P58170 312 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 RPS26P62854 115 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MZT1Q08AG7 82 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 HTR4Q13639 388 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PDE7AQ13946 482 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 RBM39Q14498 530 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 POU4F3Q15319 338 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 C9orf135Q5VTT2 229 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 NKAIN2Q5VXU1 208 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 DHRS13Q6UX07 377 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ISCA2Q86U28 154 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 KIF18BQ86Y91 864 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FRMD1Q8N878 549 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 RHEBL1Q8TAI7 183 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FANK1Q8TC84 345 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 CD200R1Q8TD46 325 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FYTTD1Q96QD9 318 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TUBA1CQ9BQE3 449 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TTTY10Q9BZA0 68 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PLEK2Q9NYT0 353 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 GHRLQ9UBU3 117 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MEMO1Q9Y316 297 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SEC16AO15027 2179 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TEX51A0A1B0GUA7 166 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 A0A1W2PP18 115 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 DIRAS1O95057 198 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 DDAH2O95865 285 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FGF3P11487 239 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 BMP1P13497 986 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 F8A1P23610 371 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MAPK3P27361 379 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 GSTM2P28161 218 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MMP12P39900 470 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MAN2A2P49641 1150 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 WSCD2Q2TBF2 565 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PIGGQ5H8A4 983 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF678Q5SXM1 525 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 COMMD6Q7Z4G1 85 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 RPS19BP1Q86WX3 136 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MMP21Q8N119 569 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 C19orf47Q8N9M1 422 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 LKAAEAR1Q8TD35 194 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZC3HAV1LQ96H79 300 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 HSH2DQ96JZ2 352 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SLC30A3Q99726 388 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MENTQ9BUN1 341 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PPIL3Q9H2H8 161 aaKnown RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 C5AR2Q9P296 337 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 BTBD17A6NE02 478 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 H0YGG7 62 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 LDB3O75112 727 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TGM1P22735 817 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MYF6P23409 242 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SLC6A8P48029 635 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ARF3P61204 181 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 PRKCDQ05655 676 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 LILRA3Q8N6C8 439 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ACOT4Q8N9L9 421 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZBTB44Q8NCP5 570 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 SMRP1Q8NCR6 262 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 HOXB13Q92826 284 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TCEAL3Q969E4 200 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 CCDC74AQ96AQ1 378 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 FAM122AQ96E09 287 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 MACROD1Q9BQ69 325 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 DHRS4Q9BTZ2 278 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ING4Q9UNL4 249 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF175Q9Y473 711 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 CACNA1BQ00975 2339 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 M0R296 226 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 RGS13O14921 159 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PTTG1O95997 202 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 IL2RAP01589 272 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PRH1P02810 166 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CHRM4P08173 479 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CISD3P0C7P0 127 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CCR7P32248 378 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CSNK1A1P48729 337 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 DEFA5Q01523 94 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF181Q2M3W8 571 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms