RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LINGO3P0C6S8 592 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 AQP1P29972 269 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 CCR4P51679 360 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 EEF1A1P68104 462 aaKnown RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 RBBP4Q09028 425 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.66□□□□□ -0.22
CD9-210ENST00000543916 GLYR1Q49A26 553 aaPredicted RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 GXYLT1Q4G148 440 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 C3P1Q6ZMU1 363 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 CMIPQ8IY22 773 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 HIPK4Q8NE63 616 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 OR5W2Q8NH69 310 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 ABTB1Q969K4 478 aaPredicted RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 SPATA9Q9BWV2 254 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 RLIMQ9NVW2 624 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 CMTM6Q9NX76 183 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 ACAD8Q9UKU7 415 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 ANGPT4Q9Y264 503 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 CHST2Q9Y4C5 530 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 GPC6Q9Y625 555 aaPredicted RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 NBASA2RRP1 2371 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 C7orf72A4D263 438 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 CDHR4A6H8M9 788 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 LRRTM2O43300 516 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 DNAJA2O60884 412 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 PABPC4LP0CB38 370 aaKnown RBP13.65□□□□□ -0.22
CD9-210ENST00000543916 ETS2P15036 469 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 CHMP24386 653 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 PCGF2P35227 344 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 STARP49675 285 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 LHX2P50458 406 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
CD9-210ENST00000543916 KCNC4Q03721 635 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 FOXF1Q12946 379 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ART3Q13508 389 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 CBFBQ13951 182 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 VMACQ2NL98 169 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 C4orf17Q53FE4 359 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ZNF311Q5JNZ3 666 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 WLSQ5T9L3 541 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 RNF220Q5VTB9 566 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 SLC15A3Q8IY34 581 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 CLIP4Q8N3C7 705 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 RELTQ969Z4 430 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ZBTB8AQ96BR9 441 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ZNF583Q96ND8 569 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 PIGQQ9BRB3 760 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
CD9-210ENST00000543916 TAGLN3Q9UI15 199 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 IFT52Q9Y366 437 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ZNF337Q9Y3M9 751 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 DNAJC13O75165 2243 aa13.65□□□□□ -0.22
CD9-210ENST00000543916 ESPL1Q14674 2120 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 CLEC18AA5D8T8 446 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 FAM47E-STBD1D6RA91 191 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 NME4O00746 187 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 AP3D1O14617 1153 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 ZNF17P17021 662 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 GCKP35557 465 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 SLC7A2P52569 658 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 CASP6P55212 293 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 QPRTQ15274 297 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 ZNF585AQ6P3V2 769 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 AAGABQ6PD74 315 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 CLEC18BQ6UXF7 455 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 ARPINQ7Z6K5 226 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 COMTD1Q86VU5 262 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 KRT73Q86Y46 540 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 GTPBP8Q8N3Z3 284 aaPredicted RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 RPRMLQ8N4K4 120 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 CLEC18CQ8NCF0 446 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 FBXO27Q8NI29 283 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 HOPXQ9BPY8 73 aaPredicted RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 ERRFI1Q9UJM3 462 aaPredicted RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 CAMK2AQ9UQM7 478 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 SLC5A6Q9Y289 635 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 HELZ2Q9BYK8 2649 aaKnown RBP13.64□□□□□ -0.23
CD9-210ENST00000543916 MYO18BQ8IUG5 2567 aa13.64□□□□□ -0.23
CD9-210ENST00000543916 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 A0A1B0GUH1 482 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
CD9-210ENST00000543916 KDM4EB2RXH2 506 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms