RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 PRR23D2P0DMB1 279 aaPredicted RBP12.75□□□□□ -0.37
VPS33A-208ENST00000543633 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 TBXA2RP21731 343 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 FXYD6P3P58550 94 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 SLC22A10Q63ZE4 541 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 ASB18Q6ZVZ8 466 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 RFPL4BQ6ZWI9 263 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 TMPRSS11FQ6ZWK6 438 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 OR8H1Q8NGG4 311 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 ABHD4Q8TB40 342 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 WDR26Q9H7D7 661 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 C14orf105Q9NVL8 296 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 SLCO1C1Q9NYB5 712 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 MGAT4AQ9UM21 535 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 SLC35A3Q9Y2D2 325 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 NTNG1Q9Y2I2 539 aa12.75□□□□□ -0.37
VPS33A-208ENST00000543633 TMA7Q9Y2S6 64 aaKnown RBP12.75□□□□□ -0.37
VPS33A-208ENST00000543633 TEX13CA0A0J9YWL9 993 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 FAM183AA6NL82 134 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 B8ZZF3 427 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 DVL2O14641 736 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF749O43361 778 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 DBIP07108 87 aaKnown RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 IFI6P09912 130 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 RAB3BP20337 219 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 SLC2A5P22732 501 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 PTGER1P34995 402 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 HSF2Q03933 536 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ARL9Q6T311 187 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 BTN2A1Q7KYR7 527 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF655Q8N720 491 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 OR10H4Q8NGA5 316 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 TMEM239Q8WW34 195 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 CDS1Q92903 461 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 YIPF5Q969M3 257 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 PGLYRP3Q96LB9 341 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 PHPT1Q9NRX4 125 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 APOBEC3BQ9UH17 382 aaKnown RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 HIDE1A8MVS5 230 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 LRRN3E7EW58 273 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 FCMRO60667 390 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 LYPD3O95274 346 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 SBK2P0C263 348 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 SULT1A3P0DMM9 295 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 SULT1A4P0DMN0 295 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 UQCRC1P31930 480 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 NTHL1P78549 312 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 FOXK2Q01167 660 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 TNFRSF17Q02223 184 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 RGS1Q08116 209 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 MAPK14Q16539 360 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 GAB4Q2WGN9 574 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 EXOSC6Q5RKV6 272 aaKnown RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 MTSS1LQ765P7 747 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 SUSD6Q92537 303 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 NECTIN4Q96NY8 510 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ABHD1Q96SE0 405 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 TEAD3Q99594 435 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 DPH1Q9BZG8 443 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 PPIL3Q9H2H8 161 aaKnown RBP12.74□□□□□ -0.37
VPS33A-208ENST00000543633 LRRN3Q9H3W5 708 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 UCKL1Q9NWZ5 548 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 ZMIZ1Q9ULJ6 1067 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 NPTNQ9Y639 398 aa12.74□□□□□ -0.37
VPS33A-208ENST00000543633 TBC1D3EA0A087X179 549 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 A0A1W2PS29 197 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 IGLON5A6NGN9 336 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 TUBAL3A6NHL2 446 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 RIIAD1A6NNX1 92 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 SNAPC5O75971 98 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 AK1P00568 194 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 ASGR2P07307 311 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 TYRP1P17643 537 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 ERVFC1P60507 584 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 LYPD4Q6UWN0 246 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 IL20RBQ6UXL0 311 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 KRT74Q7RTS7 529 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 SLC16A11Q8NCK7 471 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 OR7G2Q8NG99 324 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 OR52E1Q8NGJ3 308 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms