RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 USP53Q70EK8 1073 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 MEPCEQ7L2J0 689 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CXXC5Q7LFL8 322 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ABI3BPQ7Z7G0 1075 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 KLBQ86Z14 1044 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TRIM48Q8IWZ4 208 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 LRRC25Q8N386 305 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 LNX2Q8N448 690 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ACBD7Q8N6N7 88 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 C12orf76Q8N812 135 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 C19orf18Q8NEA5 215 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PHOSPHO2Q8TCD6 241 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ZFAND1Q8TCF1 268 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CDS1Q92903 461 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 KISS1RQ969F8 398 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 UPRTQ96BW1 309 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SECISBP2Q96T21 854 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SDF2Q99470 211 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 GON7Q9BXV9 100 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF350Q9GZX5 532 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PIGUQ9H490 435 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ISG20L2Q9H9L3 353 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TBC1D17Q9HA65 648 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 KRCC1Q9NPI7 259 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 EQTNQ9NQ60 294 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 INPP5EQ9NRR6 644 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PLSCR3Q9NRY6 295 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 BABAM2Q9NXR7 383 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 GDE1Q9NZC3 331 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 OR6C2Q9NZP2 312 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PTGFRNQ9P2B2 879 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 IL20RAQ9UHF4 553 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PHF11Q9UIL8 331 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ADAM30Q9UKF2 790 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC7A7Q9UM01 511 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SATB2Q9UPW6 733 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 WDR45Q9Y484 360 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 HEBP2Q9Y5Z4 205 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ALG5Q9Y673 324 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SIRT4Q9Y6E7 314 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CSNK1G3Q9Y6M4 447 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 MDC1Q14676 2089 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 MYO10Q9HD67 2058 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SNRNP200O75643 2136 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 C2orf16Q68DN1 1984 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A087WV62 115 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A0G2JK05 382 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 C2orf92A0A1B0GVN3 265 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A1W2PQU0 124 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 CD8B2A6NJW9 211 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 C12orf71A8MTZ7 269 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM25AB3EWG3 89 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM25CB3EWG5 89 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM25GB3EWG6 89 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 RFXAPO00287 272 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFSF14O43557 240 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PLRG1O43660 514 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PLPP2O43688 288 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PLOD3O60568 738 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PTP4A3O75365 173 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 SC5DO75845 299 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 ALX3O95076 343 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 C1QBP02746 253 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 DBIP07108 87 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 HOXC4P09017 264 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF888P0CJ79 500 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 CD8BP10966 210 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 CHRNB1P11230 501 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 ELK1P19419 428 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 MAKP20794 623 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC2A5P22732 501 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC6A1P30531 599 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 AGFG1P52594 562 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 CTBP2P56545 445 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 BTG1P62324 171 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 GALK2Q01415 458 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 RGS1Q08116 209 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 FAPQ12884 760 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 ADAM15Q13444 863 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 RUNX3Q13761 415 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 RUNX2Q13950 521 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 IL18Q14116 193 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 GALEQ14376 348 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 KRT33BQ14525 404 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 TRAM1Q15629 374 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 MAPK14Q16539 360 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PLA1AQ53H76 456 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 C6orf183Q5T699 404 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 GARNL3Q5VVW2 1013 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 HBMQ6B0K9 141 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 THOC7Q6I9Y2 204 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 TANGO2Q6ICL3 276 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 RPL13AP3Q6NVV1 102 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 FBXO42Q6P3S6 717 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PLBD1Q6P4A8 553 aa4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 PSRC1Q6PGN9 363 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-212ENST00000542495 MTSS1LQ765P7 747 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms