RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 GPRIN3Q6ZVF9 776 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 FAM214BQ7L5A3 538 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 DHFR2Q86XF0 187 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 WDSUB1Q8N9V3 476 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 OR5M1Q8NGP8 315 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 ZFAND2BQ8WV99 257 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 KCNJ9Q92806 393 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 DUS3LQ96G46 650 aaKnown RBP8.68□□□□□ -1.02
CHFR-220ENST00000541817 C3orf30Q96M34 536 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 F2RL3Q96RI0 385 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 PKP2Q99959 881 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 MUC13Q9H3R2 512 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 ACTR8Q9H981 624 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 PRDM7Q9NQW5 492 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 PLSCR4Q9NRQ2 329 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 TMEM45AQ9NWC5 275 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 EHD3Q9NZN3 535 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 TMEM181Q9P2C4 612 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 CD300AQ9UGN4 299 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 RIMS3Q9UJD0 308 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 EXO1Q9UQ84 846 aaKnown RBP8.68□□□□□ -1.02
CHFR-220ENST00000541817 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 CADP27708 2225 aa8.68□□□□□ -1.02
CHFR-220ENST00000541817 NCF1BA6NI72 391 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 C17orf51A8MQB3 221 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 NCF1CA8MVU1 366 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 CBR3O75828 277 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 ABCB1P08183 1280 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 ALDOCP09972 364 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 NCF1P14598 390 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 ZFP36P26651 326 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 ARL1P40616 181 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 NR4A2P43354 598 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 SLC6A8P48029 635 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 MRPL19P49406 292 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 SLC7A2P52569 658 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 RPS13P62277 151 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 LGALS3BPQ08380 585 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 GUSBP1Q15486 140 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 PDCD4Q53EL6 469 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 AGAP6Q5VW22 663 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 C11orf71Q6IPW1 123 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 VN1R5Q7Z5H4 357 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 ADAMTSL2Q86TH1 951 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 THOC6Q86W42 341 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 OR2L5Q8NG80 312 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 FAM216AQ8WUB2 273 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 ATP6V1E2Q96A05 226 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 EME1Q96AY2 570 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 RBM18Q96H35 190 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 PDLIM5Q96HC4 596 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 NSUN5Q96P11 429 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 ZNF747Q9BV97 191 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 OSBPL11Q9BXB4 747 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 REXO4Q9GZR2 422 aaKnown RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 C12orf49Q9H741 205 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 PELI2Q9HAT8 420 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 ARL15Q9NXU5 204 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 KLRF1Q9NZS2 232 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 LEF1Q9UJU2 399 aaPredicted RBP8.67□□□□□ -1.02
CHFR-220ENST00000541817 DKKL1Q9UK85 242 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 PCTPQ9UKL6 214 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 SLC22A14Q9Y267 594 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 SPACA6W5XKT8 324 aa8.67□□□□□ -1.02
CHFR-220ENST00000541817 A0A1W2PS29 197 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 TCRBV3S1A0A5B6 114 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 CCDC154A6NI56 674 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 AQP12BA6NM10 295 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 VWC2LB2RUY7 222 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 B4DXG7 233 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 E7EQL1 145 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 LINC01387J3KSC0 135 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SMAD9O15198 467 aaKnown RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 AHCYL1O43865 530 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ZIC3O60481 467 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SLC22A3O75751 556 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 OR4F21O95013 312 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 C8GP07360 202 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HIST1H2AGP0C0S8 130 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 HSD17B1P14061 328 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HIST1H2ADP20671 130 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ZNF10P21506 573 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 CPN2P22792 545 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HMOX2P30519 316 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 IL2RGP31785 369 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 FOXA1P55317 472 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 NME5P56597 212 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 B3GALT5-AS1P59052 145 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 NFYCQ13952 458 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 TAB1Q15750 504 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ADRM1Q16186 407 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 C18orf21Q32NC0 220 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 RNF220Q5VTB9 566 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 IL23RQ5VWK5 629 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HLA-DQA1Q5Y7H0 255 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 C18orf63Q68DL7 685 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms