RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SPAG4Q9NPE6 437 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 OSGIN2Q9Y236 505 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 NCKAP5O14513 1909 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 TPOP07202 933 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 UBTFL6P0CB48 400 aaPredicted RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ESRRAP11474 423 aaPredicted RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 PEPDP12955 493 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ELK4P28324 431 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 MAP2K6P52564 334 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 CRYZQ08257 329 aaKnown RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 PLPPR5Q32ZL2 321 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF311Q5JNZ3 666 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 C8orf82Q6P1X6 216 aaPredicted RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF550Q7Z398 422 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 YRDCQ86U90 279 aaKnown RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 PTOV1Q86YD1 416 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 CHERPQ8IWX8 916 aaKnown RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 FITM2Q8N6M3 262 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 OR2T12Q8NG77 320 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 GPR119Q8TDV5 335 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 SH3YL1Q96HL8 342 aaPredicted RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 PRDM14Q9GZV8 571 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 MED17Q9NVC6 651 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 KLHL28Q9NXS3 571 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 SLC5A6Q9Y289 635 aa17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF443Q9Y2A4 671 aaPredicted RBP17.02■□□□□ 0.32
VPS33A-205ENST00000541169 ESPL1Q14674 2120 aa17.02■□□□□ 0.31
VPS33A-205ENST00000541169 ZGRF1Q86YA3 2104 aa17.02■□□□□ 0.31
VPS33A-205ENST00000541169 GJE1A6NN92 205 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 FAM220BPB1ANY3 271 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 NPIPA2E9PIF3 369 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 E9PLN8 166 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 NPIPA3F8WFD2 350 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 ETV2O00321 342 aaPredicted RBP17.01■□□□□ 0.31
VPS33A-205ENST00000541169 BMP7P18075 431 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 ME2P23368 584 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 HTR3AP46098 478 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 GZMMP51124 257 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 PCBP3P57721 371 aaKnown RBP17.01■□□□□ 0.31
VPS33A-205ENST00000541169 HSF1Q00613 529 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 SELPLGQ14242 412 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 TMEM44Q2T9K0 475 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 EIF2S3LQ2VIR3 472 aaKnown RBP17.01■□□□□ 0.31
VPS33A-205ENST00000541169 GXYLT1Q4G148 440 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 SLC25A53Q5H9E4 307 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 MRPL2Q5T653 305 aaKnown RBP17.01■□□□□ 0.31
VPS33A-205ENST00000541169 TMEM211Q6ICI0 200 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 CBLN3Q6UW01 205 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 C16orf89Q6UX73 402 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 CCDC80Q76M96 950 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 ZZZ3Q8IYH5 903 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF583Q96ND8 569 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 TIMP4Q99727 224 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 VKORC1Q9BQB6 163 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 QRSL1Q9H0R6 528 aaKnown RBP17.01■□□□□ 0.31
VPS33A-205ENST00000541169 SLC13A4Q9UKG4 626 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 LIPGQ9Y5X9 500 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 POLEQ07864 2286 aa17.01■□□□□ 0.31
VPS33A-205ENST00000541169 GTF3C1Q12789 2109 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 TRGV8A0A0C4DH27 118 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 CFAP73A6NFT4 308 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 CYP7B1O75881 506 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 C8BP07358 591 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 LINGO3P0C6S8 592 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 CALB2P22676 271 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 UQCRFS1P47985 274 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 CCR4P51679 360 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 DLX5P56178 289 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 EEF1A1P68104 462 aaKnown RBP17■□□□□ 0.31
VPS33A-205ENST00000541169 RPS26P11Q5JNZ5 115 aaPredicted RBP17■□□□□ 0.31
VPS33A-205ENST00000541169 ARSKQ6UWY0 536 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 FGD2Q7Z6J4 655 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 DOLPP1Q86YN1 238 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 ARMC8Q8IUR7 673 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 SLC15A3Q8IY34 581 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 PGAM4Q8N0Y7 254 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 C10orf111Q8N326 155 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 PHF10Q8WUB8 498 aaKnown RBP17■□□□□ 0.31
VPS33A-205ENST00000541169 NSL1Q96IY1 281 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 UGT2B28Q9BY64 529 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 PAQR5Q9NXK6 330 aaPredicted RBP17■□□□□ 0.31
VPS33A-205ENST00000541169 ABCD2Q9UBJ2 740 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 VDAC3Q9Y277 283 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF407Q9C0G0 2248 aa17■□□□□ 0.31
VPS33A-205ENST00000541169 DNAJC13O75165 2243 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 CENPVL1A0A0U1RR11 272 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ELOVL7A1L3X0 281 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 OR2M5A3KFT3 312 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 B4DXG7 233 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 WISP2O76076 250 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ACVR2AP27037 513 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 B3GALT5-AS1P59052 145 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 PSME3P61289 254 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 COPZ1P61923 177 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 RAC1P63000 192 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 OLIG3Q7RTU3 272 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms