RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 LRIF1Q5T3J3 769 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 FAM71CQ8NEG0 241 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 GPR119Q8TDV5 335 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 OIT3Q8WWZ8 545 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 SMPDL3BQ92485 455 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 WNT2BQ93097 391 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 ENKD1Q9H0I2 346 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 CCDC134Q9H6E4 229 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 KCNJ16Q9NPI9 418 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 FGFR1OP2Q9NVK5 253 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 LIPT1Q9Y234 373 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 A0A096LPI6 279 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 CLDN24A6NM45 220 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 HNRNPRO43390 633 aaKnown RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 EFNA2O43921 213 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 NCF2P19878 526 aaPredicted RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 MAGEA8P43361 318 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 ANXA11P50995 505 aaKnown RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 FOXF2Q12947 444 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 CTU2Q2VPK5 515 aaKnown RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 LRRC74BQ6ZQY2 392 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 MEIOBQ8N635 442 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 METTL25Q8N6Q8 603 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 OR5W2Q8NH69 310 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 MARVELD3Q96A59 401 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 ZNF845Q96IR2 970 aaPredicted RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 ADGRG7Q96K78 797 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 TREX2Q9BQ50 279 aaPredicted RBP15.21■□□□□ 0.03
CD9-209ENST00000540891 TMEM120AQ9BXJ8 343 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 LAT2Q9GZY6 243 aa15.21■□□□□ 0.03
CD9-209ENST00000540891 ADGRG4Q8IZF6 3080 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 TRBV5-3A0A0A0MS03 114 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 A0A1W2PP18 115 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 AGAP5A6NIR3 686 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 ETV2O00321 342 aaPredicted RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 RCBTB2O95199 551 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 NTN1O95631 604 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 CSTAP01040 98 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 SNRPB2P08579 225 aaKnown RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 NUDT7P0C024 238 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 TFPTP0C1Z6 253 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 UBTFL6P0CB48 400 aaPredicted RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 PRF1P14222 555 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 PRKCAP17252 672 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 BMP5P22003 454 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 RPS4Y1P22090 263 aaKnown RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 CTSSP25774 331 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 CRATP43155 626 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 AGFG1P52594 562 aaKnown RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 DSTNP60981 165 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 RAC1P63000 192 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 HPCAP84074 193 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 SLC25A35Q3KQZ1 300 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 TOR1AIP2Q8NFQ8 470 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 FBXO27Q8NI29 283 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 FIG4Q92562 907 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 TM9SF2Q99805 663 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 THUMPD3Q9BV44 507 aaKnown RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 PINK1Q9BXM7 581 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 VAPAQ9P0L0 249 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 ZNF629Q9UEG4 869 aaPredicted RBP15.2■□□□□ 0.02
CD9-209ENST00000540891 HCFC1P51610 2035 aa15.2■□□□□ 0.02
CD9-209ENST00000540891 DSPPQ9NZW4 1301 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 DOCK7Q96N67 2140 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 CLIC1O00299 241 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 ADAM11O75078 769 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 CYP7B1O75881 506 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 NUDT14O95848 222 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 OPN1LWP04000 364 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 TMIGD3P0DMS9 266 aaPredicted RBP15.19■□□□□ 0.02
CD9-209ENST00000540891 NR2F1P10589 423 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 BMP2P12643 396 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 ADH6P28332 368 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 SHC1P29353 583 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 EIF1P41567 113 aaKnown RBP15.19■□□□□ 0.02
CD9-209ENST00000540891 CCR4P51679 360 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
CD9-209ENST00000540891 SF3A3Q12874 501 aaKnown RBP eCLIP15.19■□□□□ 0.02
CD9-209ENST00000540891 QPRTQ15274 297 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 RGNQ15493 299 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 SLC25A53Q5H9E4 307 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 METTL21CQ5VZV1 264 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 EIF3MQ7L2H7 374 aaKnown RBP15.19■□□□□ 0.02
CD9-209ENST00000540891 GRAMD2AQ8IUY3 354 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 GCNT2Q8N0V5 402 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 C10orf111Q8N326 155 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 TMCO5AQ8N6Q1 288 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 SLC38A5Q8WUX1 472 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 SPOCK3Q9BQ16 436 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 TMEM185BQ9H7F4 350 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 P2RX2Q9UBL9 471 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 TRIM33Q9UPN9 1127 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 SLC35A3Q9Y2D2 325 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 GPC6Q9Y625 555 aaPredicted RBP15.19■□□□□ 0.02
CD9-209ENST00000540891 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
CD9-209ENST00000540891 A0A0J9YW62 118 aa15.18■□□□□ 0.02
CD9-209ENST00000540891 EIF1AYO14602 144 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms