RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PNLIPRP2P54317 469 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 RAC3P60763 192 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MRPS22P82650 360 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CHRNB3Q05901 458 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 LGALS3BPQ08380 585 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MGAT2Q10469 447 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TBX2Q13207 712 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CHIT1Q13231 466 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ITGADQ13349 1161 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PPA1Q15181 289 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TSNQ15631 228 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TSC22D1Q15714 1073 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TMEM44Q2T9K0 475 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 IQCCQ4KMZ1 466 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CDKL4Q5MAI5 379 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ANKRD22Q5VYY1 191 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PPP4R4Q6NUP7 873 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MFSD12Q6NUT3 480 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MED27Q6P2C8 311 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PGM2L1Q6PCE3 622 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CYP20A1Q6UW02 462 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 UGT2A3Q6UWM9 527 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TFAP2EQ6VUC0 442 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 Q6ZSR9 355 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 FRA10AC1Q70Z53 315 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 BHLHA15Q7RTS1 189 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 GALNT10Q86SR1 603 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PEG10Q86TG7 708 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 P2RY8Q86VZ1 359 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TDRPQ86YL5 185 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 RNF10Q8N5U6 811 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 SNX31Q8N9S9 440 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 OR7G3Q8NG95 312 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 OR4K14Q8NGD5 310 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 OR5M1Q8NGP8 315 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TSPEARQ8WU66 669 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 HTRA1Q92743 480 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MUCL1Q96DR8 90 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ADGRG7Q96K78 797 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ADOQ96SZ5 270 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TMEM79Q9BSE2 394 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 OR51B5Q9H339 312 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PTGES2Q9H7Z7 377 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 DDX31Q9H8H2 851 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MYOZ1Q9NP98 299 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 SDHAF3Q9NRP4 125 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ING3Q9NXR8 418 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CTNNAL1Q9UBT7 734 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 BCAP29Q9UHQ4 241 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 FKBP7Q9Y680 259 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 EPN1Q9Y6I3 576 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 NCF1BA6NI72 391 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 NCF1CA8MVU1 366 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ALG1L2C9J202 215 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA8MH3BSY2 632 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ADAMDEC1O15204 470 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CDC14BO60729 498 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 EEDO75530 441 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 BCAS2O75934 225 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TOX4O94842 621 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TTC4O95801 387 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ADAP00813 363 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ATP1B1P05026 303 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PABPC4LP0CB38 370 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 DHRS4L1P0CG22 281 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CT45A8P0DMV1 189 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CT45A9P0DMV2 189 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 NCF1P14598 390 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF17P17021 662 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PGAM1P18669 254 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 EPORP19235 508 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PTAFRP25105 342 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 IL12BP29460 328 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 EVI2BP34910 448 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 BSGP35613 385 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 KRT20P35900 424 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 HSPA7P48741 367 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 EMDP50402 254 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TERF1P54274 439 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 HILS1P60008 231 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CUL3Q13618 768 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 NFYCQ13952 458 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CRYMQ14894 314 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 MORF4L2Q15014 288 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 EXOSC7Q15024 291 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 RNPS1Q15287 305 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TGFBIQ15582 683 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ZSWIM7Q19AV6 140 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PRICKLE4Q2TBC4 344 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CT45A2Q5DJT8 189 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SPANXN3Q5MJ09 141 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TIMM23BQ5SRD1 257 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SULT1C3Q6IMI6 304 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 CAVIN1Q6NZI2 390 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms