RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SIX6O95475 246 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 APOC3P02656 99 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ANKRD34CP0C6C1 535 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 HSD3B1P14060 373 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ATP1B2P14415 290 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 BPIP17213 487 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ELAVL4P26378 380 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 HSD3B2P26439 372 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 HLA-FP30511 346 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SLC6A1P30531 599 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ARFIP1P53367 373 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CTBP2P56545 445 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 KIAA1024LP59773 190 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 RAE1P78406 368 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 RIPPLY1Q0D2K3 151 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ELAVL3Q14576 367 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 LTB4RQ15722 352 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SFRP5Q5T4F7 317 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 AGTRAPQ6RW13 159 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 RPTNQ6XPR3 784 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZNF704Q6ZNC4 412 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 SHISA6Q6ZSJ9 500 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ASB18Q6ZVZ8 466 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 GPAT4Q86UL3 456 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SLC30A8Q8IWU4 369 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 OR4N4Q8N0Y3 316 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 IQCF1Q8N6M8 205 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 OR8K5Q8NH50 307 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 GATAD2BQ8WXI9 593 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 RFT1Q96AA3 541 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 MRPL48Q96GC5 212 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 SORCS2Q96PQ0 1159 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZNF416Q9BWM5 594 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 POLDIP3Q9BY77 421 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 LDAHQ9H6V9 325 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 C1GALT1Q9NS00 363 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CUEDC1Q9NWM3 386 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CD207Q9UJ71 328 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SERTAD3Q9UJW9 196 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 EXOSC1Q9Y3B2 195 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 CACNG2Q9Y698 323 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 DOPEY1Q5JWR5 2465 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TRDV1A0A1B0GX56 115 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TMEM129A0AVI4 362 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 C7orf66A4D0T2 115 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC16A5O15375 505 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PRKYO43930 277 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PIP5K1CO60331 668 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZNF821O75541 412 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 GATBO75879 557 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 KDM4BO94953 1096 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 H1F0P07305 194 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 SRPRAP08240 638 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 RRASP10301 218 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CD22P20273 847 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CCNOP22674 350 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TIA1P31483 386 aaKnown RBP eCLIP4.89□□□□□ -1.63
PROM1-220ENST00000540805 CCR7P32248 378 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NCBP2P52298 156 aaKnown RBP eCLIP4.89□□□□□ -1.63
PROM1-220ENST00000540805 LIM2P55344 173 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PCBP3P57721 371 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 DCDC1P59894 354 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 EEF1A2Q05639 463 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 COX10Q12887 443 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SP140Q13342 867 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 INSL4Q14641 139 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ETFDHQ16134 617 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 LGALSLQ3ZCW2 172 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 SPIN4Q56A73 249 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PTCRAQ6ISU1 281 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 Q6ZNB5 142 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ADGRF3Q8IZF5 1079 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 FAM26EQ8N5C1 309 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 DEFB123Q8N688 67 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZFP41Q8N8Y5 198 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR11H7Q8NGC8 314 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 RPLP0P6Q8NHW5 317 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NEIL3Q8TAT5 605 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ADAMTS14Q8WXS8 1223 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SMPDL3AQ92484 453 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 WBP1Q96G27 269 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 LRR1Q96L50 414 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZSWIM3Q96MP5 696 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZNF578Q96N58 590 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 PTCHD1Q96NR3 888 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 GPER1Q99527 375 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 KLF16Q9BXK1 252 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 ABCG5Q9H222 651 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ZNF334Q9HCZ1 680 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 KLHL42Q9P2K6 505 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 MRTO4Q9UKD2 239 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 COLQQ9Y215 455 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 MAB21L2Q9Y586 359 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 FKBP7Q9Y680 259 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 A6NCN8 305 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 FFAR1O14842 300 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms