RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	TOR1AIP2	Q8NFQ8	470 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PHOSPHO1	Q8TCT1	267 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OIT3	Q8WWZ8	545 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	JADE3	Q92613	823 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OSTF1	Q92882	214 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ZNF524	Q96C55	264 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PKNOX2	Q96KN3	472 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KLHL15	Q96M94	604 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KLHL28	Q9NXS3	571 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	EMC9	Q9Y3B6	208 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ARID1A	O14497	2285 aa		11.72	□□□□□ -0.53
SEMA4D-223	ENST00000540475		H3BNH8	94 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ZNF195	O14628	629 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	RGS16	O15492	202 aa	Predicted RBP	11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	AK1	P00568	194 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	THBD	P07204	575 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	TUBB	P07437	444 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PRKCA	P17252	672 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MATN1	P21941	496 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ME2	P23368	584 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SHC1	P29353	583 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	RPL14	P50914	215 aa	Known RBP	11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CARD18	P57730	90 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PPP2R2A	P63151	447 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PHC1	P78364	1004 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CHI3L2	Q15782	390 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KRT71	Q3SY84	523 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	HBM	Q6B0K9	141 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	STAC2	Q6ZMT1	411 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	LRRC75A-AS1	Q8N1F1	130 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	RNF128	Q8TEB7	428 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	IGFBPL1	Q8WX77	278 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	TESC	Q96BS2	214 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MRGPRX4	Q96LA9	322 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MED18	Q9BUE0	208 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PRRG4	Q9BZD6	226 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KCNE5	Q9UJ90	142 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CARD8	Q9Y2G2	431 aa		11.71	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NPIPA5	A0A0B4J1W7	369 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PRSS51	A0A1B0GVH4	220 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	GJE1	A6NN92	205 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	NPIPA7	E9PJI5	369 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ZNF264	O43296	627 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	KLF4	O43474	513 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	STX11	O75558	287 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SYNGR4	O95473	234 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	OPN1LW	P04000	364 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PABPC4L	P0CB38	370 aa	Known RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	NPIPA8	P0DM63	369 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PSMB1	P20618	241 aa	Known RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	AGTR1	P30556	359 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SLC1A6	P48664	564 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CTBP2	P56545	445 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	FOXF1	Q12946	379 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	RNPS1	Q15287	305 aa	Known RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	TOMM34	Q15785	309 aa	Predicted RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ACKR1	Q16570	336 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ZNF239	Q16600	458 aa	Known RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SPDYE7P	Q495Y7	208 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SHE	Q5VZ18	495 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	OR4F3	Q6IEY1	312 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	OGFOD2	Q6N063	350 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	BEND4	Q6ZU67	534 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ZNF550	Q7Z398	422 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CLECL1	Q8IZS7	167 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	OR5D16	Q8NGK9	328 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	OR5W2	Q8NH69	310 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	FBXO27	Q8NI29	283 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PIGT	Q969N2	578 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CPNE4	Q96A23	557 aa	Predicted RBP	11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ZNF350	Q9GZX5	532 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	LAT2	Q9GZY6	243 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SAP130	Q9H0E3	1048 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	COQ10B	Q9H8M1	238 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	MEAF6	Q9HAF1	191 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	TIGAR	Q9NQ88	270 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	GPR52	Q9Y2T5	361 aa		11.7	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ROS1	P08922	2347 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	WDR91	A4D1P6	747 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SERINC4	A6NH21	518 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CFLAR	O15519	480 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	FCMR	O60667	390 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	UGT2B17	O75795	530 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	AGR2	O95994	175 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PLG	P00747	810 aa	Predicted RBP	11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	FPR1	P21462	350 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	KCNJ5	P48544	419 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	RAC3	P60763	192 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	SKP2	Q13309	424 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CASP8	Q14790	479 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PDCD2	Q16342	344 aa	Predicted RBP	11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	DPY19L1	Q2PZI1	675 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PGS1	Q32NB8	556 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	ANXA8L1	Q5VT79	327 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	PRSS57	Q6UWY2	283 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	CROCCP2	Q86T23	111 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	GABRG1	Q8N1C3	465 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	FAM71C	Q8NEG0	241 aa		11.69	□□□□□ -0.54
SEMA4D-223	ENST00000540475	WFDC11	Q8NEX6	87 aa		11.69	□□□□□ -0.54

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