RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PLPPR2Q96GM1 343 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 COX4I2Q96KJ9 171 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 MRGPRX4Q96LA9 322 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 HS3ST6Q96QI5 342 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 DUSP26Q9BV47 211 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 MECRQ9BV79 373 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 ROPN1BQ9BZX4 212 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-211ENST00000539843 ESRP2Q9H6T0 727 aaKnown RBP13.67□□□□□ -0.22
UBE3B-211ENST00000539843 ROPN1Q9HAT0 212 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-211ENST00000539843 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-211ENST00000539843 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 CARD8Q9Y2G2 431 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
UBE3B-211ENST00000539843 H7C1Q1 480 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 EIF4E2O60573 245 aaKnown RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SPAG7O75391 227 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 C6orf47O95873 294 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 UBL4AP11441 157 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 PTH2RP49190 550 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 PPP2R2BQ00005 443 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 C6orf136Q5SQH8 315 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 ZCCHC23Q6ZST2 131 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SSX8Q7RTT4 187 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 KRTAP1-3Q8IUG1 177 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 ATP6V1C2Q8NEY4 427 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 RFWD2Q8NHY2 731 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 ZFP90Q8TF47 636 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 ROBO4Q8WZ75 1007 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 KISS1RQ969F8 398 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SMR3AQ99954 134 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SERINC1Q9NRX5 453 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 EXD2Q9NVH0 621 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 FBXO34Q9NWN3 711 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 NOP53Q9NZM5 478 aaKnown RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-211ENST00000539843 ABCA2Q9BZC7 2435 aa13.66□□□□□ -0.22
UBE3B-211ENST00000539843 HS3ST1O14792 307 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 ZNF264O43296 627 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 AGR2O95994 175 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 CAPRIN1Q14444 709 aaKnown RBP13.65□□□□□ -0.22
UBE3B-211ENST00000539843 P2RY6Q15077 328 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 UGT3A2Q3SY77 523 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 KLHL26Q53HC5 615 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 EXOSC6Q5RKV6 272 aaKnown RBP13.65□□□□□ -0.22
UBE3B-211ENST00000539843 C3orf33Q6P1S2 294 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 ZNF611Q8N823 705 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 OR5W2Q8NH69 310 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 OR2W6PQ8NHA6 318 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 ABHD3Q8WU67 409 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 COQ8BQ96D53 544 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
UBE3B-211ENST00000539843 MARK4Q96L34 752 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 ZIM3Q96PE6 472 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 CXorf36Q9H7Y0 433 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 SLC17A7Q9P2U7 560 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 LGALS13Q9UHV8 139 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 ICAM5Q9UMF0 924 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 RNF115Q9Y4L5 304 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 NAV3Q8IVL0 2385 aa13.65□□□□□ -0.22
UBE3B-211ENST00000539843 HRNRQ86YZ3 2850 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-211ENST00000539843 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 KLF4O43474 513 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 STX11O75558 287 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 CYP7B1O75881 506 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
UBE3B-211ENST00000539843 THBDP07204 575 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 CD3EP07766 207 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 YES1P07947 543 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 PRKCAP17252 672 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 ATP5J2P56134 94 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 RAC3P60763 192 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
UBE3B-211ENST00000539843 HPCAP84074 193 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 PGS1Q32NB8 556 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 ATAD3BQ5T9A4 648 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 CBLN3Q6UW01 205 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 TUSC5Q8IXB3 177 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 LRRN4CLQ8ND94 238 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 OR5AK3PQ8NH89 298 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 S100PBPQ96BU1 408 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 SLC35G5Q96KT7 338 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 POTEKPQ9BYX7 375 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 NMUR2Q9GZQ4 415 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 GPATCH2Q9NW75 528 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 GIMAP2Q9UG22 337 aa13.64□□□□□ -0.23
UBE3B-211ENST00000539843 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms