RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MSX1P28360 303 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 MEOX1P50221 254 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 RNF144AP50876 292 aaPredicted RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 CD226Q15762 336 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 NDUFA5Q16718 116 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 MRPL2Q5T653 305 aaKnown RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 FNDC7Q5VTL7 733 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 SLC6A19Q695T7 634 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 DHRS4L2Q6PKH6 230 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 ZNF836Q6ZNA1 936 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 DHFR2Q86XF0 187 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 TAMM41Q96BW9 452 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 NTNG2Q96CW9 530 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 NSMCE2Q96MF7 247 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 RNF145Q96MT1 663 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 FRMD6Q96NE9 622 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 UBL7Q96S82 380 aaPredicted RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 ZFP64Q9NPA5 681 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 KLHL28Q9NXS3 571 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 ACTR3BQ9P1U1 418 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 RPS6KA6Q9UK32 745 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 BAG5Q9UL15 447 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 LHX6Q9UPM6 363 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 EPG5Q9HCE0 2579 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 PIEZO2Q9H5I5 2752 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 CLDN24A6NM45 220 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 GNB5O14775 395 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 SNPHO15079 494 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 HCRTR2O43614 444 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 EIF4E2O60573 245 aaKnown RBP14.08□□□□□ -0.16
DDB1-216ENST00000539739 CYP7B1O75881 506 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 SORBS2O94875 1100 aaKnown RBP14.08□□□□□ -0.16
DDB1-216ENST00000539739 RASAL1O95294 804 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 SERPINA1P01009 418 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 EEF1A1P68104 462 aaKnown RBP14.08□□□□□ -0.16
DDB1-216ENST00000539739 PLGLB1Q02325 96 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 KLRB1Q12918 225 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 LY6DQ14210 128 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 PLEKHN1Q494U1 663 aaPredicted RBP14.08□□□□□ -0.16
DDB1-216ENST00000539739 TIGD3Q6B0B8 471 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 RPUSD3Q6P087 351 aaKnown RBP14.08□□□□□ -0.16
DDB1-216ENST00000539739 PLCZ1Q86YW0 608 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 EID3Q8N140 333 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 OR4K17Q8NGC6 315 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 RTN4RQ9BZR6 473 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 LAT2Q9GZY6 243 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 PTGES2Q9H7Z7 377 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 B4GALT7Q9UBV7 327 aa14.08□□□□□ -0.16
DDB1-216ENST00000539739 NINQ8N4C6 2090 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 A0A0G2JMM0 328 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 A0A1W2PPB8 328 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 A0A1W2PRS3 328 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 CDHR4A6H8M9 788 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 KIR3DP1A8MWS1 328 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
DDB1-216ENST00000539739 SUV39H1O43463 412 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
DDB1-216ENST00000539739 KCNJ5P48544 419 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 DUSP7Q16829 419 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 NADK2Q4G0N4 442 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 CYBRD1Q53TN4 286 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 MTX3Q5HYI7 312 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 OR5M10Q6IEU7 315 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 CBLL1Q75N03 491 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 GRAMD2AQ8IUY3 354 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 ZNF440Q8IYI8 595 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 TMCO5AQ8N6Q1 288 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 PROX1Q92786 737 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 SH3YL1Q96HL8 342 aaPredicted RBP14.07□□□□□ -0.16
DDB1-216ENST00000539739 LRGUKQ96M69 825 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 TRIM15Q9C019 465 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 EVA1AQ9H8M9 152 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 RABL2BQ9UNT1 228 aa14.07□□□□□ -0.16
DDB1-216ENST00000539739 SAMD4AQ9UPU9 718 aaKnown RBP14.07□□□□□ -0.16
DDB1-216ENST00000539739 IGLV3-32A0A0A0MS00 114 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 ACOT7O00154 380 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 SYT5O00445 386 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 ADAM10O14672 748 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 CBR3O75828 277 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 CIB2O75838 187 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 ZNF682O95780 498 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 C8BP07358 591 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 CCDC159P0C7I6 412 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 P2RX1P51575 399 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 CRYBA2P53672 197 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 SELENOWP63302 87 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 MS4A2Q01362 244 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 ZNF117Q03924 483 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 FOXO1Q12778 655 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 DCTN2Q13561 401 aaKnown RBP14.06□□□□□ -0.16
DDB1-216ENST00000539739 SPPL2CQ8IUH8 684 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 WDSUB1Q8N9V3 476 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 ZFP62Q8NB50 900 aaPredicted RBP14.06□□□□□ -0.16
DDB1-216ENST00000539739 TOR1AIP2Q8NFQ8 470 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 OR52E4Q8NGH9 312 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 POP5Q969H6 163 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms