RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 PCDHGA5Q9Y5G8 931 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 CDH10Q9Y6N8 788 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 NUP210LQ5VU65 1888 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 SSTR4P31391 388 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 IDUAP35475 653 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 RAB40BQ12829 278 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 ZAR1Q86SH2 424 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 ATCAYQ86WG3 371 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 CACTIN-AS1Q8N1I8 211 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 ANKK1Q8NFD2 765 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 VSTM2LQ96N03 204 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 ZNF578Q96N58 590 aaPredicted RBP18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 ZNF559Q9BR84 538 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 MMP27Q9H306 513 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 MED17Q9NVC6 651 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 SERTAD3Q9UJW9 196 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 GPR52Q9Y2T5 361 aa18.71■□□□□ 0.59
PACSIN3-211ENST00000539589 PRAMEF2O60811 474 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 DRD5P21918 477 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 RNF144AP50876 292 aaPredicted RBP18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 HSD17B7P56937 341 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF267Q14586 743 aaPredicted RBP18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 SSX1Q16384 188 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 TMEM44Q2T9K0 475 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF404Q494X3 552 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 MINDY4Q4G0A6 757 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 SLC30A6Q6NXT4 461 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 IGFN1Q86VF2 1251 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 GPR135Q8IZ08 494 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 OR2T33Q8NG76 320 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 TMEM239Q8WW34 195 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 ATOH1Q92858 354 aaPredicted RBP18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 CENPOQ9BU64 300 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 TMEM27Q9HBJ8 222 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 LANCL2Q9NS86 450 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 COL27A1Q8IZC6 1860 aaPredicted RBP18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 KIF26BQ2KJY2 2108 aa18.7■□□□□ 0.58
PACSIN3-211ENST00000539589 KDM4EB2RXH2 506 aaPredicted RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 MYL12AP19105 171 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 MAOAP21397 527 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 C3orf38Q5JPI3 329 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 PDZK1Q5T2W1 519 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF613Q6PF04 617 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 OR4Q3Q8NH05 313 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 RNF217Q8TC41 542 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 RFKQ969G6 155 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 RNFT2Q96EX2 444 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 MVB12AQ96EY5 273 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 DACH2Q96NX9 599 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 CHCHD3Q9NX63 227 aaKnown RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 hCG_2014768A0A024R1R8 64 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 UNC119BA6NIH7 251 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 HRKO00198 91 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 CDC42EP2O14613 210 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 SURF4O15260 269 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 HMGN1P05114 100 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF883P0CG24 379 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 MTNR1AP48039 350 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 RAB15P59190 212 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 PGGHGQ32M88 737 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 SOWAHCQ53LP3 525 aaPredicted RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 Q6ZNX1 250 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 SLITRK4Q8IW52 837 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF614Q8N883 585 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 NDC1Q9BTX1 674 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 CNPPD1Q9BV87 410 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 HHATLQ9HCP6 504 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 Q9N2J8 555 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 FGF20Q9NP95 211 aaPredicted RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 CCDC59Q9P031 241 aaKnown RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 ZNF223Q9UK11 482 aaPredicted RBP18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 A3GALT2U3KPV4 340 aa18.69■□□□□ 0.58
PACSIN3-211ENST00000539589 METTL15A6NJ78 407 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 NTN3O00634 580 aaPredicted RBP18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 DSCR3O14972 297 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 LYPD3O95274 346 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 TIAF1O95411 115 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 CH25HO95992 272 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 EFNA3P52797 238 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 MLLT11Q13015 90 aaPredicted RBP18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 ITGADQ13349 1161 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 DOC2BQ14184 412 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 C1orf189Q5VU69 101 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 WDR88Q6ZMY6 472 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 GRAMD2AQ8IUY3 354 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 CDK20Q8IZL9 346 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 OR4N2Q8NGD1 307 aa18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 CNOT9Q92600 299 aaKnown RBP18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 PELOQ9BRX2 385 aaKnown RBP18.68■□□□□ 0.58
PACSIN3-211ENST00000539589 HBQ1P09105 142 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 ENDOUP21128 410 aaKnown RBP18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 PTNP21246 168 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 SOX3P41225 446 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 DUSP3P51452 185 aaPredicted RBP18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 GAS1P54826 345 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 PRKCDQ05655 676 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 BIKQ13323 160 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 SERTAD2Q14140 314 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 INAQ16352 499 aa18.67■□□□□ 0.58
PACSIN3-211ENST00000539589 ZSWIM7Q19AV6 140 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms