RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 FAAHO00519 579 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MRASO14807 208 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TMPRSS11DO60235 418 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EIF1BO60739 113 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NOS1APO75052 506 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ITGA10O75578 1167 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CHRNGP07510 517 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LYNP07948 512 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 THRBP10828 461 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PNMTP11086 282 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 AGAP20933 346 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 IDH3AP50213 366 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HTR6P50406 440 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NR0B1P51843 470 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DSCR4P56555 118 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PIN1Q13526 163 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CBFBQ13951 182 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 VEZF1Q14119 521 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HABP2Q14520 560 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 KPNB1Q14974 876 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EBPQ15125 230 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LTB4RQ15722 352 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HYAL4Q2M3T9 481 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 C18orf21Q32NC0 220 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 UGT3A2Q3SY77 523 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FAM69BQ5VUD6 431 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MFSD12Q6NUT3 480 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 Q6ZSR9 355 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZCCHC23Q6ZST2 131 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 C6orf120Q7Z4R8 191 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 UBE3DQ7Z6J8 389 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CLNKQ7Z7G1 428 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SFTPA2Q8IWL1 248 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PRR18Q8N4B5 295 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NFAM1Q8NET5 270 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 OR52R1Q8NGF1 315 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 BRIX1Q8TDN6 353 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PAQR8Q8TEZ7 354 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DGCR14Q96DF8 476 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CRELD1Q96HD1 420 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 RAB3IPQ96QF0 476 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SLC35A5Q9BS91 424 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DOHHQ9BU89 302 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TAPBPLQ9BX59 468 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PARD6GQ9BYG4 376 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NPHS2Q9NP85 383 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NGBQ9NPG2 151 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NECTIN3Q9NQS3 549 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ACTR3BQ9P1U1 418 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MAP10Q9P2G4 905 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF639Q9UID6 485 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MAGEL2Q9UJ55 1249 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FBXL3Q9UKT7 428 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CES1P1Q9UKY3 287 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MCTS1Q9ULC4 181 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GPR55Q9Y2T6 319 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 WDR45Q9Y484 360 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GPR45Q9Y5Y3 372 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PLXNB3Q9ULL4 1909 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 A0A0A6YYJ9 748 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 A0A0G2JN53 185 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SMIM31A0A1B0GVY4 71 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 C7orf72A4D263 438 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CCT8L1PA6NM43 557 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 HSPB2A8KAH6 182 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 AHRRA9YTQ3 701 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SAP18O00422 153 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 NR5A2O00482 541 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FRS3O43559 492 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OR2T1O43869 369 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SUSD5O60279 629 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FMO6PO60774 539 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CCNKO75909 580 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PIAS1O75925 651 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OPN1MWP04001 364 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 IGKV3-11P04433 115 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 UBTFL6P0CB48 400 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OPN1MW2P0DN77 364 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OPN1MW3P0DN78 364 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 KITP10721 976 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 G6PDP11413 515 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TCN1P20061 433 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TBXA2RP21731 343 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GPX3P22352 226 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 NR4A1P22736 598 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FEN1P39748 380 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 WNT5AP41221 380 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TSPAN5P62079 268 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 HSPB3Q12988 150 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 HSPB2Q16082 182 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TIGD6Q17RP2 521 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PRICKLE4Q2TBC4 344 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FAM174BQ3ZCQ3 159 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GTDC1Q4AE62 458 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GPAT3Q53EU6 434 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FHL5Q5TD97 284 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 REEP3Q6NUK4 255 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 BLOC1S3Q6QNY0 202 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF793Q6ZN11 406 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms