RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 RUVBL1Q9Y265 456 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-221ENST00000537934 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 OR6C68A6NDL8 312 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 RNASET2O00584 256 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 STARP49675 285 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 MAT1AQ00266 395 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 MLLT1Q03111 559 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 SFRP4Q6FHJ7 346 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 CD300LDQ6UXZ3 194 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 LRRC70Q7Z2Q7 622 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 TMEM25Q86YD3 366 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 RELL2Q8NC24 303 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 GOT1L1Q8NHS2 421 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 APOBEC4Q8WW27 367 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 WDR89Q96FK6 387 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 ENKD1Q9H0I2 346 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 SEBOXQ9HB31 216 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 RASL12Q9NYN1 266 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 NFKBIL1Q9UBC1 381 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 ZNF69Q9UC07 566 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 ANGPT4Q9Y264 503 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 PLEKHM1Q9Y4G2 1056 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 OR51B4Q9Y5P0 310 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 TRIOO75962 3097 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 BRWD1Q9NSI6 2320 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 FGF19O95750 216 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 EGFP01133 1207 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 IGF2P01344 180 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 H1F0P07305 194 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 FBP1P09467 338 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 IDSP22304 550 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 CD70P32970 193 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 RAD52P43351 418 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 CACNG1Q06432 222 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 ATP13A5Q4VNC0 1218 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 PRAMEF13Q5VWM6 474 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 TRIM40Q6P9F5 258 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 MOB3CQ70IA8 216 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 HDDC3Q8N4P3 179 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 LKAAEAR1Q8TD35 194 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 ALG14Q96F25 216 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 LRRC3BQ96PB8 259 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 SLC35A5Q9BS91 424 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 FUZQ9BT04 418 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 BTBD1Q9H0C5 482 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 FBXW2Q9UKT8 454 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 WNT6Q9Y6F9 365 aa10.59□□□□□ -0.71
SEMA4D-221ENST00000537934 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 LRRC72A6NJI9 287 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 K7ERQ8 282 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 CTDSPLO15194 276 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 GPR39O43194 453 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 RNF13O43567 381 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 LCMT2O60294 686 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SPDEFO95238 335 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SLC25A14O95258 325 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 CNR1P21554 472 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 DDX6P26196 483 aaKnown RBP eCLIP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 MPGP29372 298 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 OPRD1P41143 372 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ASMTP46597 345 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 LMAN2Q12907 356 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ECH1Q13011 328 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 MELKQ14680 651 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SLC5A12Q1EHB4 618 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ZNF626Q68DY1 528 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 TPRA1Q86W33 373 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SKA3Q8IX90 412 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ZFP82Q8N141 532 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 POGLUT1Q8NBL1 392 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SPRYD4Q8WW59 207 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 RBM14Q96PK6 669 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 PIGMQ9H3S5 423 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 GPN1Q9HCN4 374 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ZFP57Q9NU63 452 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 TAS2R5Q9NYW4 299 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 VPS29Q9UBQ0 182 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 FBXL3Q9UKT7 428 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 FCF1Q9Y324 198 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 GSAPA4D1B5 854 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SNRPGP15A8MWD9 76 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 NEDD8-MDP1E9PL57 170 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ARPC1BO15143 372 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 LINC01565O15544 149 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 POP7O75817 140 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ARAFP10398 606 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ZNF3P17036 446 aa10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 ZNF7P17097 686 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 PAICSP22234 425 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-221ENST00000537934 SHC1P29353 583 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms