RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CST3P01034 146 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TRAPPC2P0DI81 140 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TRAPPC2BP0DI82 140 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TYRP14679 529 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CD1DP15813 335 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GPX3P22352 226 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GPR176Q14439 515 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TARBP2Q15633 366 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SOWAHAQ2M3V2 549 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KCTD18Q6PI47 426 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DBX2Q6ZNG2 339 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KIAA0907Q7Z7F0 614 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SGPP2Q8IWX5 399 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR4K13Q8NH42 304 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SPRYD4Q8WW59 207 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 BCO1Q9HAY6 547 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RALGAPA2Q2PPJ7 1873 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NPIPA2E9PIF3 369 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NPIPA3F8WFD2 350 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GAPDHSO14556 408 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KCNQ2O43526 872 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ANGPTL7O43827 346 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SLC35G6P0C7Q6 338 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 IMPA1P29218 277 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 IRF5Q13568 498 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HACD4Q5VWC8 232 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR4F15Q8NGB8 312 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR13C9Q8NGT0 318 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RNF128Q8TEB7 428 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SLC38A3Q99624 504 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GJD2Q9UKL4 321 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 E7ESA3 106 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ADH1CP00326 375 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ZXDBP98169 803 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR2T2Q6IF00 324 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TTLQ8NG68 377 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GGHQ92820 318 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TOMM40LQ969M1 308 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 BSCL2Q96G97 398 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SPIN2AQ99865 258 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SPIN2BQ9BPZ2 258 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DPEP3Q9H4B8 488 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 LIN7BQ9HAP6 207 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SDR39U1Q9NRG7 319 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 IGSF5Q9NSI5 407 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NID2Q14112 1375 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR2A25A4D2G3 310 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CSF2RBP32927 897 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CPOXP36551 454 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SH3BP2P78314 561 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GPR17Q13304 367 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RPS26P11Q5JNZ5 115 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CLDN19Q8N6F1 224 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SIGLECL1Q8N7X8 197 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ACSS1Q9NUB1 689 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DERAQ9Y315 318 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TRPM7Q96QT4 1865 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 FRMPD3Q5JV73 1810 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 XRCC3O43542 346 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DNAJB6O75190 326 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 LAMP1P11279 417 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CTSOP43234 321 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HABP2Q14520 560 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SYPL2Q5VXT5 272 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HLA-CQ95604 372 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DHRS4Q9BTZ2 278 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 WASF3Q9UPY6 502 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 FCF1Q9Y324 198 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 A0A0A6YYJ9 748 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TRIM77I1YAP6 450 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF8P17098 575 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OAZ1P54368 228 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RAB35Q15286 201 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 PCBP1Q15365 356 aaKnown RBP eCLIP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GRIK5Q16478 980 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HAGHQ16775 308 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 PHYHD1Q5SRE7 291 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 BEND7Q8N7W2 519 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NINJ1Q92982 152 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR6C76A6NM76 312 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 MAFO75444 373 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 C8orf89P0DMQ9 161 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 BMP1P13497 986 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CLRN1P58418 232 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 DUSP7Q16829 419 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CNKSR3Q6P9H4 555 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KIAA1324Q6UXG2 1013 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KANSL1Q7Z3B3 1105 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 REM2Q8IYK8 340 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 KCNRGQ8N5I3 272 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RAB3CQ96E17 227 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SPNS1Q9H2V7 528 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NCDNQ9UBB6 729 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 FAM171A2A8MVW0 826 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MPIG6BO95866 241 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SNRPBP14678 240 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PTPN2P17706 415 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms