RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CMC2Q9NRP2 79 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 PRR23D1E9PI22 279 aaPredicted RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 E9PI62 339 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 H0Y8X5 98 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 RCBTB2O95199 551 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 PRR23D2P0DMB1 279 aaPredicted RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 UGT2B7P16662 529 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 NT5EP21589 574 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 EFR3AQ14156 821 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 KIR2DS3Q14952 304 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 FAM27D1Q5T7N8 215 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 FCRL6Q6DN72 434 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 PRSS41Q7RTY9 318 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 DTX3Q8N9I9 347 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 OR5M3Q8NGP4 307 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 OR10G6Q8NH81 332 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 TSACCQ96A04 125 aaPredicted RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 FAM131CQ96AQ9 280 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 BPIFA2Q96DR5 249 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 MRPS2Q9Y399 296 aaKnown RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 SLC22A31A6NKX4 558 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 FGF17O60258 216 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TRIM3O75382 744 aaPredicted RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 SLC43A1O75387 559 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 SAGP10523 405 aaPredicted RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 POLR2CP19387 275 aaPredicted RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 F8A1P23610 371 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 GARNL3Q5VVW2 1013 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 FIGLAQ6QHK4 219 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 CDK20Q8IZL9 346 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 CDRT4Q8N9R6 151 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 AHCYL2Q96HN2 611 aaKnown RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 GFM1Q96RP9 751 aaKnown RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 TEAD3Q99594 435 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 RPP25Q9BUL9 199 aaKnown RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 ENAMQ9NRM1 1142 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 DUSP22Q9NRW4 184 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 SIGLEC7Q9Y286 467 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TRAV27A0A087WT01 109 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 ORC5O43913 435 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 MT-ND5P03915 603 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 CLUP10909 449 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 ZNF24P17028 368 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 NOS3P29474 1203 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 ERP29P30040 261 aaKnown RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 BMP8BP34820 402 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 E2F1Q01094 437 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 SLC3A1Q07837 685 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 FAPQ12884 760 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 AMZ1Q400G9 498 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 EXOSC6Q5RKV6 272 aaKnown RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TIGD3Q6B0B8 471 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 RPL13AP3Q6NVV1 102 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TMPRSS11FQ6ZWK6 438 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 ABHD13Q7L211 337 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 LRRC28Q86X40 367 aaPredicted RBP13.27□□□□□ -0.29
USP44-203ENST00000537435 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 OR4M1Q8NGD0 313 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 OR51A7Q8NH64 312 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 NDEL1Q9GZM8 345 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 CYSLTR2Q9NS75 346 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 SATB2Q9UPW6 733 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 MED31Q9Y3C7 131 aa13.27□□□□□ -0.29
USP44-203ENST00000537435 TNFSF14O43557 240 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 LANCL1O43813 399 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 EIF4EP06730 217 aaKnown RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 ARSBP15848 533 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 ZNF10P21506 573 aaPredicted RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 THBS2P35442 1172 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 AGFG1P52594 562 aaKnown RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 OR10A3P58181 314 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 KIAA1024LP59773 190 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 EXOSC7Q15024 291 aaKnown RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 VASH1Q7L8A9 365 aaPredicted RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 IGFLR1Q9H665 355 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 MEPEQ9NQ76 525 aaPredicted RBP13.26□□□□□ -0.29
USP44-203ENST00000537435 INPP5EQ9NRR6 644 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 ACTR10Q9NZ32 417 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 PILRAQ9UKJ1 303 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 ZMIZ1Q9ULJ6 1067 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 RASD1Q9Y272 281 aa13.26□□□□□ -0.29
USP44-203ENST00000537435 A0A087WV62 115 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 A0A1B0GVC2 190 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GXYLT2A0PJZ3 443 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms