RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 POLR3FQ9H1D9 316 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-208ENST00000537047 SLC25A51Q9H1U9 297 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 LPAR2Q9HBW0 351 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 SH2D2AQ9NP31 389 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 IL19Q9UHD0 177 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 SCML2Q9UQR0 700 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 PLLPQ9Y342 182 aa2.45□□□□□ -2.02
CCDC7-208ENST00000537047 LRRC30A6NM36 301 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 WASH3PC4AMC7 463 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 INSP01308 110 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 ZCCHC18P0CG32 403 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 GCFC2P16383 781 aaKnown RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 LHX2P50458 406 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 LIM2P55344 173 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 NTHL1P78549 312 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 RGS1Q08116 209 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 PDIA5Q14554 519 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 WDR74Q6RFH5 385 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 WASH2PQ6VEQ5 465 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 TMEM184AQ6ZMB5 413 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 NRMQ8IXM6 262 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 DQX1Q8TE96 717 aaKnown RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 GIPC3Q8TF64 312 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 SLC13A3Q8WWT9 602 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 DEDD2Q8WXF8 326 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 TMEM121Q9BTD3 319 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 PAK1IP1Q9NWT1 392 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 UTP6Q9NYH9 597 aaKnown RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 CNOT2Q9NZN8 540 aaKnown RBP2.44□□□□□ -2.02
CCDC7-208ENST00000537047 FETUBQ9UGM5 382 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 BTNL2Q9UIR0 455 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 SLCO1B1Q9Y6L6 691 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 CCDC7Q96M83 1385 aa2.44□□□□□ -2.02
CCDC7-208ENST00000537047 THSD7BQ9C0I4 1608 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 EFNA2O43921 213 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 AKR7A3O95154 331 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 MT-ATP6P00846 226 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 CSF2P04141 144 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 RRASP10301 218 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 ZNF136P52737 540 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 NSDHLQ15738 373 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 TOR1AIP1Q5JTV8 583 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 RNF165Q6ZSG1 346 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 RABEPKQ7Z6M1 372 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 LINC01551Q86U37 167 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 C17orf82Q86X59 251 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-208ENST00000537047 SNX32Q86XE0 403 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 SAXO1Q8IYX7 474 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 ZNF740Q8NDX6 193 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 OR1E3Q8WZA6 343 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 MS4A14Q96JA4 679 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 CHIAQ9BZP6 476 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
CCDC7-208ENST00000537047 POLR2J3Q9H1A7 115 aaKnown RBP2.43□□□□□ -2.02
CCDC7-208ENST00000537047 GPN2Q9H9Y4 310 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-208ENST00000537047 INPP5EQ9NRR6 644 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 ANO10Q9NW15 660 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 RDH8Q9NYR8 311 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 ATP6V1HQ9UI12 483 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 CYTH4Q9UIA0 394 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 PRPF19Q9UMS4 504 aaKnown RBP2.43□□□□□ -2.02
CCDC7-208ENST00000537047 NUDCQ9Y266 331 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 AP4B1Q9Y6B7 739 aa2.43□□□□□ -2.02
CCDC7-208ENST00000537047 LOC100131303A0A0U1RQF7 123 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 HELTA6NFD8 242 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 OR6C65A6NJZ3 312 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 A8MUA0 341 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 BCAS2O75934 225 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-208ENST00000537047 IGHV3-48P01763 117 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 PCCAP05165 728 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-208ENST00000537047 ALPPP05187 535 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 HBQ1P09105 142 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 ALPPL2P10696 532 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 PDHBP11177 359 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 DLSTP36957 453 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 APOC4P55056 127 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 HERVK_113P61574 105 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 GABPB1Q06547 395 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-208ENST00000537047 AP1B1Q10567 949 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 ST3GAL3Q11203 375 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 LDLRAP1Q5SW96 308 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 FAM120AOSQ5T036 256 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 KPRPQ5T749 579 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-208ENST00000537047 TSPO2Q5TGU0 170 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 LANCL3Q6ZV70 420 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 C1orf186Q6ZWK4 172 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 VRK2Q86Y07 508 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 KDM8Q8N371 416 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 MTURNQ8N3F0 131 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 RNF182Q8N6D2 247 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 RNF148Q8N7C7 305 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 OR56B1Q8NGI3 324 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 SLC5A11Q8WWX8 675 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 OR5B2Q96R09 309 aa2.42□□□□□ -2.02
CCDC7-208ENST00000537047 ARHGDIGQ99819 225 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms