RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KRT16P08779 473 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 SHC1P29353 583 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 P2RX1P51575 399 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 SUMO3P55854 103 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TP53BP2Q13625 1128 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 SPDYE7PQ495Y7 208 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 KLHL26Q53HC5 615 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 DCST2Q5T1A1 773 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 CBLN3Q6UW01 205 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NATD1Q8N6N6 113 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ZNF611Q8N823 705 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 FBXO27Q8NI29 283 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ABHD3Q8WU67 409 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 OR5P2Q8WZ92 322 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 HDHD5Q9BXW7 423 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GIMAP2Q9UG22 337 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ICAM5Q9UMF0 924 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 CARD8Q9Y2G2 431 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ACTL7BQ9Y614 415 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GPC6Q9Y625 555 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 FBN3Q75N90 2809 aa17.54■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ANK3Q12955 4377 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NPIPA5A0A0B4J1W7 369 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NPIPA7E9PJI5 369 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 EFNA2O43921 213 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 LYPLA1O75608 230 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NPIPA8P0DM63 369 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NID1P14543 1247 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PTGR1Q14914 329 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 LSM12Q3MHD2 195 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TMEM176BQ3YBM2 270 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ATP6AP1LQ52LC2 224 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 XKR7Q5GH72 579 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ALKBH2Q6NS38 261 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TUSC5Q8IXB3 177 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 BANPQ8N9N5 519 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PSMA8Q8TAA3 256 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 AGR3Q8TD06 166 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 S100PBPQ96BU1 408 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PRPF18Q99633 342 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TACO1Q9BSH4 297 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 MECRQ9BV79 373 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 SRXN1Q9BYN0 137 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 CXorf36Q9H7Y0 433 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GP6Q9HCN6 339 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ZNF701Q9NV72 531 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 KLHL13Q9P2N7 655 aa17.53■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GTPBP1O00178 669 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 OIP5O43482 229 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GCM2O75603 506 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PRKD3O94806 890 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 C6orf47O95873 294 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PCSK6P29122 969 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 RNF144AP50876 292 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ATP12AP54707 1039 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 VSNL1P62760 191 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 ZNF844Q08AG5 666 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 WDR93Q6P2C0 686 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 TFAP2EQ6VUC0 442 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 FCRLAQ7L513 359 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 NUFIP2Q7Z417 695 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GABRG1Q8N1C3 465 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GPR119Q8TDV5 335 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 AKAP1Q92667 903 aaKnown RBP eCLIP17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 MOAP1Q96BY2 351 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 C1orf50Q9BV19 199 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 GPATCH2Q9NW75 528 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 KCNE3Q9Y6H6 103 aa17.52■□□□□ 0.4
TNFRSF1B-204ENST00000536782 PRKCAP17252 672 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ATP5J2P56134 94 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TOMM34Q15785 309 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 C6orf136Q5SQH8 315 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SFRP5Q5T4F7 317 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 IL23RQ5VWK5 629 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZCCHC23Q6ZST2 131 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PRIMA1Q86XR5 153 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZNF614Q8N883 585 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 FNDC5Q8NAU1 212 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ATP6V1C2Q8NEY4 427 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SFXN5Q8TD22 340 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZFP90Q8TF47 636 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 COQ8BQ96D53 544 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 MRGPRX4Q96LA9 322 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NGBQ9NPG2 151 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SLC17A7Q9P2U7 560 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 DTNAQ9Y4J8 743 aa17.51■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CADP27708 2225 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CFLARO15519 480 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NTN1O95631 604 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 YES1P07947 543 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PRPS1L1P21108 318 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 IL32P24001 234 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SERPINB5P36952 375 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PPP2R2BQ00005 443 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ADAM5Q6NVV9 412 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 EMBQ6PCB8 327 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SLC43A2Q8N370 569 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms