RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 R3HCC1LQ7Z5L2 792 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LILRB1Q8NHL6 650 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CLHC1Q8NHS4 586 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FBXO27Q8NI29 283 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 POC1BQ8TC44 478 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PIWIL2Q8TC59 973 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 EGLN2Q96KS0 407 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TSSK3Q96PN8 268 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TRAF4Q9BUZ4 470 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 BTBD2Q9BX70 525 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SRXN1Q9BYN0 137 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 HOXD1Q9GZZ0 328 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ACSS1Q9NUB1 689 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GIN1Q9NXP7 522 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TBK1Q9UHD2 729 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PRR14LQ5THK1 2151 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 IGHV3-15A0A0B4J1V0 119 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ABCD4O14678 606 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 KRT16P08779 473 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SHC1P29353 583 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MAP3K8P41279 467 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ASMTP46597 345 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C21orf58P58505 322 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LASP1Q14847 261 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CCDC153Q494R4 210 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SPDYE7PQ495Y7 208 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CLEC6AQ6EIG7 209 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LRIG3Q6UXM1 1119 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TOR1AIP2Q8NFQ8 470 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RFWD2Q8NHY2 731 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FAM110BQ8TC76 370 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 HOXB13Q92826 284 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CDS1Q92903 461 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C16orf58Q96GQ5 468 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RADILQ96JH8 1075 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 STACQ99469 402 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TRIM2Q9C040 744 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 AMBRA1Q9C0C7 1298 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DUSP22Q9NRW4 184 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GDF2Q9UK05 429 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CR1P17927 2039 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FBN1P35555 2871 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ABCA1O95477 2261 aa11.51□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TBX19O60806 448 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 HMGN2P05204 90 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SDC1P18827 310 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GGT1P19440 569 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ENPP1P22413 925 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PRPH2P23942 346 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RPL3P39023 403 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OR3A2P47893 321 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RNF144AP50876 292 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DSCR9P59020 149 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RASGEF1BQ0VAM2 473 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TP53BP2Q13625 1128 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PGGHGQ32M88 737 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GALNTL6Q49A17 601 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF385BQ569K4 471 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C6orf52Q5T4I8 152 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C3orf33Q6P1S2 294 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DNAJC14Q6Y2X3 702 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DEPDC4Q8N2C3 294 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ADAMTS15Q8TE58 950 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MTERF3Q96E29 417 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FAM120BQ96EK7 910 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MRGPRX4Q96LA9 322 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 EMC3Q9P0I2 261 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NTMQ9P121 344 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MID2Q9UJV3 735 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MGAT4BQ9UQ53 548 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CARD8Q9Y2G2 431 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TMED5Q9Y3A6 229 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ACTL7BQ9Y614 415 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NPIPA5A0A0B4J1W7 369 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FAM234BA2RU67 622 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TMEM114B3SHH9 223 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NPIPA7E9PJI5 369 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 G3V2L1 256 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 AZIN1O14977 448 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RIPK2O43353 540 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NDUFS7O75251 213 aa11.49□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms