RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MAT2BQ9NZL9 334 aa12.2□□□□□ -0.46
LDLR-203ENST00000535915 POLHQ9Y253 713 aa12.2□□□□□ -0.46
LDLR-203ENST00000535915 RCBTB2O95199 551 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 CT62P0C5K7 136 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 TBXA2RP21731 343 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 RPS7P62081 194 aaKnown RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 CCDC58Q4VC31 144 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 LCN1P1Q5VSP4 162 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 TRIQKQ629K1 86 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 Q8N402 240 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 ZNF614Q8N883 585 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 C19orf18Q8NEA5 215 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 NLGN4YQ8NFZ3 816 aaPredicted RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 BAHD1Q8TBE0 780 aaPredicted RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 BPIFA2Q96DR5 249 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 DEPDC7Q96QD5 511 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 HRASLS2Q9NWW9 162 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 N6AMT1Q9Y5N5 214 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 KNL1Q8NG31 2342 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 DAPL1A0PJW8 107 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 GXYLT2A0PJZ3 443 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 FAM172BPA6NC97 362 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 FAM86C2PA6NEL3 165 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 CYR61O00622 381 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 PLA2G10O15496 165 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 SEC14L5O43304 696 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 RNF13O43567 381 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 BMP8BP34820 402 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 RPS5P46782 204 aaKnown RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 POU6F2P78424 691 aaPredicted RBP12.19□□□□□ -0.46
LDLR-203ENST00000535915 P2RY14Q15391 338 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 MZT2AQ6P582 158 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 TMEM91Q6ZNR0 172 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 BMP8AQ7Z5Y6 402 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 VWA5B2Q8N398 1253 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 LNX2Q8N448 690 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 OR13C2Q8NGS9 318 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 ENKURQ8TC29 256 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 GRHL3Q8TE85 626 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 CPNE7Q9UBL6 633 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 MED31Q9Y3C7 131 aa12.19□□□□□ -0.46
LDLR-203ENST00000535915 B4DXG7 233 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 PRR23D1E9PI22 279 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 DVL2O14641 736 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 REM1O75628 298 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 LYPD3O95274 346 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 PRR23D2P0DMB1 279 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 GAAP10253 952 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 TPMTP51580 245 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 VSX2P58304 361 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 TBRG1Q3YBR2 411 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 AMZ1Q400G9 498 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZFP69Q49AA0 526 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 FCRLBQ6BAA4 426 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZCCHC12Q6PEW1 402 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 Q6ZSR6 202 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 SFTPA2Q8IWL1 248 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 RDH10Q8IZV5 341 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 OR10H4Q8NGA5 316 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 TWSG1Q9GZX9 223 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 OR51V1Q9H2C8 321 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 IL21RQ9HBE5 538 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 BABAM2Q9NXR7 383 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 TRAV27A0A087WT01 109 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 GTPBP1O00178 669 aaKnown RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 BRINP1O60477 761 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 GALR3O60755 368 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 RGS9O75916 674 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 MYL9P24844 172 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 KIR2DL3P43628 341 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 EVX1P49640 407 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 FOXK2Q01167 660 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.18□□□□□ -0.465e-6■□□□□ 10.9
LDLR-203ENST00000535915 SIGIRRQ6IA17 410 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 RPL13AP3Q6NVV1 102 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZC3H14Q6PJT7 736 aaKnown RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZAR1Q86SH2 424 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 CA13Q8N1Q1 262 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 CSNK1A1LQ8N752 337 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 SLC37A3Q8NCC5 494 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 RSC1A1Q92681 617 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 DMRTB1Q96MA1 342 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 RNF32Q9H0A6 362 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 KCNN2Q9H2S1 579 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 PPP1R3EQ9H7J1 279 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 TMEM27Q9HBJ8 222 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 SIRT4Q9Y6E7 314 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 SPTBP11277 2137 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 HMX3A6NHT5 357 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 SGK494L7N484 410 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 HCN1O60741 890 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 FMO6PO60774 539 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 AK1P00568 194 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms