RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ROBO4Q8WZ75 1007 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 HOXB13Q92826 284 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FBXW5Q969U6 566 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 DUSP26Q9BV47 211 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 BHLHE41Q9C0J9 482 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 FBXO34Q9NWN3 711 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 EMC3Q9P0I2 261 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 LAMP3Q9UQV4 416 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 CARD8Q9Y2G2 431 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 DTNAQ9Y4J8 743 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 CCL27Q9Y4X3 112 aa11.84□□□□□ -0.51
CLSTN3-205ENST00000535452 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 A0A0J9YW62 118 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 A0A1W2PP18 115 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 STX11O75558 287 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 YES1P07947 543 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 UQCRBP14927 111 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ENPP1P22413 925 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 PCSK6P29122 969 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ALDH3A1P30838 453 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 IDUAP35475 653 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 SLC6A8P48029 635 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ANXA11P50995 505 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF117Q03924 483 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 VEZF1Q14119 521 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 CTU2Q2VPK5 515 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF385BQ569K4 471 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 IL23RQ5VWK5 629 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 C3orf33Q6P1S2 294 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 DEPDC4Q8N2C3 294 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 OR7A2PQ8NGA2 310 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 OR2T11Q8NH01 316 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 OR5W2Q8NH69 310 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF563Q8TA94 476 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 RNF128Q8TEB7 428 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 AKAP1Q92667 903 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 GIMAP5Q96F15 307 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 FCRL1Q96LA6 429 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 SMR3AQ99954 134 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 C1orf50Q9BV19 199 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 POTEKPQ9BYX7 375 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ROPN1BQ9BZX4 212 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 ROPN1Q9HAT0 212 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
CLSTN3-205ENST00000535452 A0A1W2PPR1 153 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 SNUPNO95149 360 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 LY6G6DO95868 133 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 C6orf47O95873 294 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 CHRNGP07510 517 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 LINGO3P0C6S8 592 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 TFPIP10646 304 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 LAMP1P11279 417 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 PGCP20142 388 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 MATN1P21941 496 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 MAP3K8P41279 467 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 ITGADQ13349 1161 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 GNA13Q14344 377 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 PTGR1Q14914 329 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 GUSBP1Q15486 140 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 GPR68Q15743 365 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 STK11Q15831 433 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 SFRP5Q5T4F7 317 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 ANXA8L1Q5VT79 327 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 NUDCD3Q8IVD9 361 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 TUSC5Q8IXB3 177 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 ABHD3Q8WU67 409 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 SLC25A43Q8WUT9 341 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 ADGRG7Q96K78 797 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 SLC35G5Q96KT7 338 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 HS6ST2Q96MM7 605 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 C12orf65Q9H3J6 166 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 BARX1Q9HBU1 254 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 POU2F3Q9UKI9 436 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 ACTL7BQ9Y614 415 aa11.82□□□□□ -0.52
CLSTN3-205ENST00000535452 MED12Q93074 2177 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 RNF103-CHMP3A0A140T963 221 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 B4DXG7 233 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 ANKRD28O15084 1053 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 SPAG7O75391 227 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 ADAP00813 363 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 CSTAP01040 98 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 MYZAPP0CAP1 466 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 BMP4P12644 408 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 CHI3L1P36222 383 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 RAC3P60763 192 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms