RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	GNG14	A0A1W2PPG7	69 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TRIM64	A6NGJ6	449 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TRIM64B	A6NI03	449 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TTC36	A6NLP5	189 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TRPC5OS	A6NMA1	111 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	C17orf51	A8MQB3	221 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647		H0YC42	278 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	HDAC3	O15379	428 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	NME6	O75414	186 aa	Predicted RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	IL33	O95760	270 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	PGR	P06401	933 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	THBD	P07204	575 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	CHRNG	P07510	517 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TSPAN8	P19075	237 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	DDC	P20711	480 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	PCSK6	P29122	969 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TIA1	P31483	386 aa	Known RBP eCLIP	10.35	□□□□□ -0.75	5e-6	■■■■□ 20.5
CTNND1-238	ENST00000534647	KCNJ5	P48544	419 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	CLK3	P49761	638 aa	Known RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	NR1H2	P55055	460 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TPD52	P55327	224 aa	Predicted RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	CLDN20	P56880	219 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	PPP2R2B	Q00005	443 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	ACSM2A	Q08AH3	577 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	C17orf67	Q0P5P2	114 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	DECR1	Q16698	335 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	UNC50	Q53HI1	259 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	SPDYA	Q5MJ70	313 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	SH2D4B	Q5SQS7	431 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	ACSM2B	Q68CK6	577 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	ZNF550	Q7Z398	422 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	OR2L13	Q8N349	312 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	ZNF611	Q8N823	705 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	CDYL2	Q8N8U2	506 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	OR6K3	Q8NGY3	331 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	METTL6	Q8TCB7	284 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	AGR3	Q8TD06	166 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	DUSP19	Q8WTR2	217 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	GFM2	Q969S9	779 aa	Known RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	HBEGF	Q99075	208 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TMEM204	Q9BSN7	226 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	RTN4R	Q9BZR6	473 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	FANCF	Q9NPI8	374 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	STOML1	Q9UBI4	398 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	HAO1	Q9UJM8	370 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	TRIM33	Q9UPN9	1127 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	ATR	Q13535	2644 aa		10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	RAI1	Q7Z5J4	1906 aa	Predicted RBP	10.35	□□□□□ -0.75
CTNND1-238	ENST00000534647	INAFM1	C9JVW0	142 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	UPK1A	O00322	258 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	SCO2	O43819	266 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	HNRNPCL1	O60812	293 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	DNAJA2	O60884	412 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	CRCP	O75575	148 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	AQP8	O94778	261 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	SOX30	O94993	753 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	ENO1	P06733	434 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	ANXA4	P09525	319 aa	Predicted RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	ARRB2	P32121	409 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	RASSF2	P50749	326 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	PSMD4	P55036	377 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	PKNOX1	P55347	436 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	SIRPA	P78324	504 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	PRR5	P85299	388 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	CAPRIN1	Q14444	709 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	TCHHL1	Q5QJ38	904 aa	Predicted RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	ADAM5	Q6NVV9	412 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	STAC2	Q6ZMT1	411 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	GPRIN3	Q6ZVF9	776 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	CXXC5	Q7LFL8	322 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	GGN	Q86UU5	652 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	RNF217	Q8TC41	542 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	APIP	Q96GX9	242 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	BBS4	Q96RK4	519 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	LMF2	Q9BU23	707 aa	Known RBP	10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	RASSF4	Q9H2L5	321 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	GSTO2	Q9H4Y5	243 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	CXorf56	Q9H5V9	222 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647		Q9N2J8	555 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	SAR1A	Q9NR31	198 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	GLRX2	Q9NS18	164 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	ZDHHC2	Q9UIJ5	367 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647	EMC9	Q9Y3B6	208 aa		10.34	□□□□□ -0.75
CTNND1-238	ENST00000534647		A0A087WZY1	265 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	C7orf72	A4D263	438 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ANKRD34B	A5PLL1	514 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647		H0YHG0	523 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647		H3BML4	177 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ADAMDEC1	O15204	470 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	SEC14L5	O43304	696 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	SS18L1	O75177	396 aa	Predicted RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	CRLF1	O75462	422 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	NGFR	P08138	427 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF17	P17021	662 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	TCEA1	P23193	301 aa	Known RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	HMOX2	P30519	316 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms