RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ATG16L2Q8NAA4 619 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OR4N2Q8NGD1 307 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OR6T1Q8NGN1 323 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 MAGEE2Q8TD90 523 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC38A4Q969I6 547 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 EFHD2Q96C19 240 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OMA1Q96E52 524 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 IMMP1LQ96LU5 166 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF597Q96LX8 424 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF559Q9BR84 538 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 MESP1Q9BRJ9 268 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TBL1XR1Q9BZK7 514 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 GABARAPL1Q9H0R8 117 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 NTN4Q9HB63 628 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 CPNE5Q9HCH3 593 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 USE1Q9NZ43 259 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 PDP1Q9P0J1 537 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 MYOTQ9UBF9 498 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ACAD8Q9UKU7 415 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 LYVE1Q9Y5Y7 322 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 A0A1W2PQD3 144 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 SERINC4A6NH21 518 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 NPIPB9F8W1W9 429 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 M0R3H8 397 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 GTPBP1O00178 669 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 FAAHO00519 579 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 PPM1BO75688 479 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 CCNB2O95067 398 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 OR5F1O95221 314 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 CSTAP01040 98 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 TNFRSF1BP20333 461 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC6A8P48029 635 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 HMGA2P52926 109 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 AQP4P55087 323 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 AIMP2Q13155 320 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 MED21Q13503 144 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 CMPK2Q5EBM0 449 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 FGD3Q5JSP0 725 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ATP1A1-AS1Q5TC04 95 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF605Q86T29 641 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 EPHX4Q8IUS5 362 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ELP5Q8TE02 316 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 GIPC3Q8TF64 312 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 SNRNP27Q8WVK2 155 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ZG16BQ96DA0 208 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ADOQ96SZ5 270 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 TRIM2Q9C040 744 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 NMNAT1Q9HAN9 279 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 TMEM27Q9HBJ8 222 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 EXOSC3Q9NQT5 275 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 TEKT2Q9UIF3 430 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ZMIZ1Q9ULJ6 1067 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 NPFFR2Q9Y5X5 522 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
CCDC90B-218ENST00000533761 ARGFXA6NJG6 315 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 PDLIM1O00151 329 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 SOCS2O14508 198 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 TP53I11O14683 189 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 DIRAS1O95057 198 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 UTS2O95399 124 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 ALPLP05186 524 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 UBL4AP11441 157 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 IGFBP5P24593 272 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 RPS6KA3P51812 740 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 CXADRP78310 365 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 PPP2R2BQ00005 443 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 GANABQ14697 944 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 TRAM2Q15035 370 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 MICAQ29983 383 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 IQCCQ4KMZ1 466 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF613Q6PF04 617 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 OPN5Q6U736 354 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 NUP54Q7Z3B4 507 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF555Q8NEP9 628 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 OR10G2Q8NGC3 310 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 TTC9Q92623 222 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 MCHR1Q99705 422 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 ING2Q9H160 280 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 SDHAF3Q9NRP4 125 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 RPS6KB2Q9UBS0 482 aa10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 YARS2Q9Y2Z4 477 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-218ENST00000533761 TRAPPC13A5PLN9 417 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 ALG1L2C9J202 215 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 ZNF264O43296 627 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 NDUFB5O43674 189 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 TSPAN2O60636 221 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 IGKV1D-16P01601 117 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 SERPINA7P05543 415 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 YAP1P46937 504 aaKnown RBP10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 MAPK14Q16539 360 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 KLHL26Q53HC5 615 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 LCE1DQ5T752 114 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 TTC23Q5W5X9 447 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 JMJD6Q6NYC1 403 aaPredicted RBP10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 OLIG3Q7RTU3 272 aa10.02□□□□□ -0.81
CCDC90B-218ENST00000533761 APLFQ8IW19 511 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms