RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GLSO94925 669 aaPredicted RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 SOX3P41225 446 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 WBP2NLQ6ICG8 309 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 OR51Q1Q8NH59 317 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF417Q8TAU3 575 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 LGALS12Q96DT0 336 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 PRRC1Q96M27 445 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 MYADMQ96S97 322 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 H0YGG7 62 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 SIGLEC6O43699 453 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 OR1D5P58170 312 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 FGL1Q08830 312 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 DMWDQ09019 674 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 DUSP6Q16828 381 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 EIF2S3LQ2VIR3 472 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 TXNDC15Q96J42 360 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF300Q96RE9 604 aaPredicted RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 GPR83Q9NYM4 423 aa13.86□□□□□ -0.19
PCDHA9-202ENST00000532602 COL22A1Q8NFW1 1626 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 H0Y8X5 98 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 HMGA1P17096 107 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ERVK-16P61578 105 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 PPA1Q15181 289 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 TRIM61Q5EBN2 209 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 MANEAQ5SRI9 462 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 GPR139Q6DWJ6 353 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CMTM1Q8IZ96 169 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 MFSD9Q8NBP5 474 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ASB16Q96NS5 453 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 MBNL1Q9NR56 388 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 M0R233 179 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CACNG3O60359 315 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 RP2O75695 350 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CNN3Q15417 329 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CPOQ8IVL8 374 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 MMP21Q8N119 569 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 C19orf47Q8N9M1 422 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 TBC1D15Q8TC07 691 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ABCG5Q9H222 651 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 IER3IP1Q9Y5U9 82 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CDK2P24941 298 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CTGFP29279 349 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 IL20RBQ6UXL0 311 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 VRK2Q86Y07 508 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 FRMD1Q8N878 549 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 THAP10Q9P2Z0 257 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CNOT4O95628 575 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 CSF2P04141 144 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 RGS19P49795 217 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 RAB38P57729 211 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 PHC1P78364 1004 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF77Q15935 545 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 TMEM244Q5VVB8 128 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 LHX8Q68G74 356 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ADAMTS16Q8TE57 1224 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 RSC1A1Q92681 617 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 FAM71F1Q96KD3 344 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 EGLN2Q96KS0 407 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF587Q96SQ5 575 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 HDAC8Q9BY41 377 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 B8ZZF3 427 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 F5H0A9 414 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 AGTR1P30556 359 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF791Q3KP31 576 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 INTS14Q96SY0 518 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 B3GNT3Q9Y2A9 372 aa13.85□□□□□ -0.19
PCDHA9-202ENST00000532602 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 GCAP28676 217 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 GRAMD2AQ8IUY3 354 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 OR4K3Q96R72 315 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 VRK1Q99986 396 aaPredicted RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 SLC22A7Q9Y694 548 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 C12orf71A8MTZ7 269 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 SLC1A7O00341 560 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 TPMTP51580 245 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 RACK1P63244 317 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 UCN3Q969E3 161 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 HSPB11Q9Y547 144 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 MAB21L2Q9Y586 359 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 CREBL2O60519 120 aaPredicted RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 IGHG1P01857 330 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 TCN2P20062 427 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 RAB3AP20336 220 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 FNTBP49356 437 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 LRRC37A5PQ49AS3 106 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 C5orf46Q6UWT4 87 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 PRSS48Q7RTY5 328 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 FAM217AQ8IXS0 508 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF610Q8N9Z0 462 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 OR7D2Q96RA2 312 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms