RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 MBD3L5A6NJ08 208 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 H3BNH8 94 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 LINC01387J3KSC0 135 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 NR2F1P10589 423 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 UBL4AP11441 157 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 PEPDP12955 493 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF17P17021 662 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 IL11P20809 199 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 GRNP28799 593 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 TIMP3P35625 211 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ANXA11P50995 505 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 SUMO3P55854 103 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 DLX5P56178 289 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CLDN20P56880 219 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 KCNJ10P78508 379 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 FADDQ13158 208 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ADRM1Q16186 407 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 SLC25A53Q5H9E4 307 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 RAET1LQ5VY80 246 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 PLXDC2Q6UX71 529 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 GGNQ86UU5 652 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF614Q8N883 585 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 TOR1AIP2Q8NFQ8 470 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 TNIP2Q8NFZ5 429 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 OR5W2Q8NH69 310 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 LILRB4Q8NHJ6 448 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CNOT9Q92600 299 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 MAL2Q969L2 176 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 SDCCAG3Q96C92 435 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 DTNBP1Q96EV8 351 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 ANKRD27Q96NW4 1050 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 TREX2Q9BQ50 279 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 PIGQQ9BRB3 760 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CPPED1Q9BRF8 314 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CALHM2Q9HA72 323 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 BCL2L10Q9HD36 194 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CLCF1Q9UBD9 225 aa12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-220ENST00000532375 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 FXYD1O00168 92 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 GTPBP1O00178 669 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 CLDN14O95500 239 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 CSTAP01040 98 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 PRKCAP17252 672 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 DRD4P21917 467 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 ADSLP30566 484 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 LSP1P33241 339 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 SRYQ05066 204 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 TFF3Q07654 80 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 SELPLGQ14242 412 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 CTU2Q2VPK5 515 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 EIF3MQ7L2H7 374 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 LACC1Q8IV20 430 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 ACBD4Q8NC06 268 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 TMEM19Q96HH6 336 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 RNF145Q96MT1 663 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 CGREF1Q99674 301 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 A4GALTQ9NPC4 353 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 THUMPD1Q9NXG2 353 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 P2RX2Q9UBL9 471 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 AP4B1Q9Y6B7 739 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 ADGRG4Q8IZF6 3080 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 UNC79Q9P2D8 2635 aa12.56□□□□□ -0.4
TSPAN4-220ENST00000532375 PKDREJQ9NTG1 2253 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 CLCA1A8K7I4 914 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 C19orf84I3L1E1 186 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 TGM6O95932 706 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 BCHEP06276 602 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 ARAFP10398 606 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 NID1P14543 1247 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 ADH6P28332 368 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 SHC1P29353 583 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 CHRNB4P30926 498 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 GCKP35557 465 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 GZMMP51124 257 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 RAC1P63000 192 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 FOXF1Q12946 379 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 RPS26P11Q5JNZ5 115 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 PRAMEF8Q5VWM4 474 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 PRAMEF7Q5VXH5 474 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 METTL25Q8N6Q8 603 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 TRIB1Q96RU8 372 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 UCK2Q9BZX2 261 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 RAD21L1Q9H4I0 556 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 TMEM38AQ9H6F2 299 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 DNAJB12Q9NXW2 375 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms