RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 BAMBIQ13145 260 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 ILKQ13418 452 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 TAF13Q15543 124 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 SMAD2Q15796 467 aaKnown RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 NLRC3Q7RTR2 1065 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 GALNTL5Q7Z4T8 443 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 SIAH3Q8IW03 269 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 SERPINA12Q8IW75 414 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF676Q8N7Q3 588 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 ADAMTS19Q8TE59 1207 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF582Q96NG8 517 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 TREX2Q9BQ50 279 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 PRELID3BQ9Y3B1 194 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 MED31Q9Y3C7 131 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 C11orf98E9PRG8 122 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 HRO43593 1189 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 DPM1O60762 260 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 FBXO45P0C2W1 286 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 MMP12P39900 470 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 TRAM2Q15035 370 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 CEACAM19Q7Z692 300 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 VRK2Q86Y07 508 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 OR52H1Q8NGJ2 320 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 OR4K13Q8NH42 304 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 MRPL48Q96GC5 212 aaKnown RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 CXorf36Q9H7Y0 433 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 DLL4Q9NR61 685 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 CLDND1Q9NY35 253 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 MYEF2Q9P2K5 600 aaKnown RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 EDARQ9UNE0 448 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 PLEKHM1Q9Y4G2 1056 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 GCM2O75603 506 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 BMP8BP34820 402 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 CD79BP40259 229 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 VEGFBP49765 207 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 SEC23BQ15437 767 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 BMP8AQ7Z5Y6 402 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 BOLLQ8N9W6 283 aaKnown RBP16.72■□□□□ 0.27
LTBP3-210ENST00000528516 WDR20Q8TBZ3 569 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 PHOSPHO1Q8TCT1 267 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 KLHL15Q96M94 604 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 THSD1Q9NS62 852 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 LRRC37A2A6NM11 1700 aa16.72■□□□□ 0.27
LTBP3-210ENST00000528516 ANTXRLA6NF34 631 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 PRAMEF25A6NGN4 478 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SEC14L5O43304 696 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 CBX7O95931 251 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 GNALP38405 381 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ADH7P40394 386 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ATXN7L3Q14CW9 347 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ST3GAL2Q16842 350 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 PIP5KL1Q5T9C9 394 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 PODNL1Q6PEZ8 512 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 CBARPQ8N350 705 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF454Q8N9F8 522 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 THEM6Q8WUY1 208 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DPYSL5Q9BPU6 564 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 BHLHE41Q9C0J9 482 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 FBXL21Q9UKT6 434 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 MYOFQ9NZM1 2061 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 A0A1B0GW55 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 RP2O75695 350 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L2P0CJ85 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L3P0CJ86 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L4P0CJ87 422 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L5P0CJ88 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L6P0CJ89 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4L7P0CJ90 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 CTSAP10619 480 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 MYOGP15173 224 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 CAMK2DQ13557 499 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SLITRK4Q8IW52 837 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SENP5Q96HI0 755 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 FOXN4Q96NZ1 517 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SEC22CQ9BRL7 303 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 MED18Q9BUE0 208 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUX4Q9UBX2 424 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 DUXAA6NLW8 204 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF806P0C7X5 589 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SLC6A18Q96N87 628 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SLC38A3Q99624 504 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 ACTR10Q9NZ32 417 aa16.71■□□□□ 0.27
LTBP3-210ENST00000528516 EXOSC1Q9Y3B2 195 aaKnown RBP16.71■□□□□ 0.27
LTBP3-210ENST00000528516 SLC22A23A1A5C7 686 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 EIF1AYO14602 144 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 SOD1P00441 154 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 EIF4EP06730 217 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 IRS1P35568 1242 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 PSMA6P60900 246 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 ACSM5Q6NUN0 579 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 TTLL10Q6ZVT0 673 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 FRMD1Q8N878 549 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 OR2T4Q8NH00 348 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 GHITMQ9H3K2 345 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 C11orf49Q9H6J7 331 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 RDH14Q9HBH5 336 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 CALML5Q9NZT1 146 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms