RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LPAR3Q9UBY5 353 aa9.42□□□□□ -0.9
CPSF1-203ENST00000527916 PROCRQ9UNN8 238 aa9.42□□□□□ -0.9
CPSF1-203ENST00000527916 ACTL7BQ9Y614 415 aa9.42□□□□□ -0.9
CPSF1-203ENST00000527916 SCDO00767 359 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 WIPF1O43516 503 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 SERPINE1P05121 402 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 MYZAPP0CAP1 466 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 HPGDP15428 266 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 ABCE1P61221 599 aaKnown RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 POU6F2P78424 691 aaPredicted RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 RUNX1T1Q06455 604 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 LASP1Q14847 261 aaKnown RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 PTGR1Q14914 329 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 BHLHB9Q6PI77 547 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 SZRD1Q7Z422 152 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 ZAR1Q86SH2 424 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 UBQLNLQ8IYU4 475 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 GTPBP8Q8N3Z3 284 aaPredicted RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 COX18Q8N8Q8 333 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF610Q8N9Z0 462 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 OR56A1Q8NGH5 318 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 SFXN5Q8TD22 340 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 ZBTB8AQ96BR9 441 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 PLPPR2Q96GM1 343 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 TMEM204Q9BSN7 226 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 ACTRT3Q9BYD9 372 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 SLCO5A1Q9H2Y9 848 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 GPATCH2Q9NW75 528 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 FBXO34Q9NWN3 711 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
CPSF1-203ENST00000527916 GIMAP2Q9UG22 337 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 HAO1Q9UJM8 370 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
CPSF1-203ENST00000527916 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 DUXAA6NLW8 204 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 H3BML4 177 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 OVOL3O00110 214 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ADAMDEC1O15204 470 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ITM2AO43736 263 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 PLAUP00749 431 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 CGAP01215 116 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 THBDP07204 575 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 G6PDP11413 515 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 FCGR2AP12318 317 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 IL11P20809 199 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 EFNA1P20827 205 aaPredicted RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 TCEA1P23193 301 aaKnown RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 PSMA4P25789 261 aaKnown RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ADH6P28332 368 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ACVR1BP36896 505 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 CLDN20P56880 219 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 RAC1P63000 192 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 PON3Q15166 354 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 GUSBP1Q15486 140 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 CHI3L2Q15782 390 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 EXOC3L2Q2M3D2 409 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 KLHL26Q53HC5 615 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 C6orf52Q5T4I8 152 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 AP1ARQ63HQ0 302 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 GGNQ86UU5 652 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF527Q8NB42 609 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 OR8J2Q8NGG1 315 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 OR5M1Q8NGP8 315 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 ADAMTS15Q8TE58 950 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 FIG4Q92562 907 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 FBXW5Q969U6 566 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 HS6ST2Q96MM7 605 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 RHNO1Q9BSD3 238 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 C1orf50Q9BV19 199 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 DUSP26Q9BV47 211 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 PINK1Q9BXM7 581 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 TMEM160Q9NX00 188 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 FAF1Q9UNN5 650 aaPredicted RBP9.4□□□□□ -0.9
CPSF1-203ENST00000527916 SNX8Q9Y5X2 465 aa9.4□□□□□ -0.9
CPSF1-203ENST00000527916 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 NPIPB9F8W1W9 429 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 H0YC42 278 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 H3BNH8 94 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 RNASET2O00584 256 aaKnown RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 SEC14L5O43304 696 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ADAM11O75078 769 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 C6orf47O95873 294 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 FESP07332 822 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ATP6V1C1P21283 382 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 EIF1P41567 113 aaKnown RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 SLC1A6P48664 564 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 RPL14P50914 215 aaKnown RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ZNF41P51814 821 aaPredicted RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ATP12AP54707 1039 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 TPD52P55327 224 aaPredicted RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 HBA1P69905 142 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms