RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SERHLQ9NQF3 203 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CYSLTR2Q9NS75 346 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 MAN2C1Q9NTJ4 1040 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ACSS1Q9NUB1 689 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 UTS2RQ9UKP6 389 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TCFL5Q9UL49 500 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ZDHHC8Q9ULC8 765 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CYP8B1Q9UNU6 501 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 MOKQ9UQ07 419 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SLC9A8Q9Y2E8 581 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 RPL36Q9Y3U8 105 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 MTCH2Q9Y6C9 303 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ZNF638Q14966 1978 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 ANKRD31Q8N7Z5 1873 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 PCNTO95613 3336 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ITGB4P16144 1822 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 FXYD6-FXYD2A0A087WZ82 144 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CCDC187A0A096LP49 1063 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 KANTRA0A1W2PQU2 76 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 UBE2QL1A1L167 161 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SYNDIG1LA6NDD5 238 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 H7C417 338 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 EMC8O43402 210 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 EIF4E2O60573 245 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 PPP1R11O60927 126 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 DDNO94850 711 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 NXPH2O95156 264 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SPDEFO95238 335 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 GALTP07902 379 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ITGA5P08648 1049 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ALPIP09923 528 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 THEGLP0DJG4 465 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 HKR1P10072 659 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 NME1P15531 152 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 GALP22466 123 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 PSMB4P28070 264 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 EPHA2P29317 976 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 GABRA5P31644 462 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 MAS1LP35410 378 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 AHRP35869 848 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CD200P41217 278 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 AVPR1BP47901 424 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 IDH2P48735 452 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 PPM1FP49593 454 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 TDGF1P3P51864 188 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 DIO3P55073 304 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CTBP2P56545 445 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF280AP59817 542 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 RAP1BP61224 184 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SNRPGP62308 76 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 TLE2Q04725 743 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TLE4Q04727 773 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ABHD18Q0P651 414 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TPBGQ13641 420 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 GAMTQ14353 236 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CSHL1Q14406 222 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF345Q14585 488 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TTLL9Q3SXZ7 439 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF805Q5CZA5 627 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 TMEM201Q5SNT2 666 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF648Q5T619 568 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF626Q68DY1 528 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 ETFRF1Q6IPR1 90 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 RAB12Q6IQ22 244 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 EIF5AL1Q6IS14 154 aaKnown RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF613Q6PF04 617 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 NCEH1Q6PIU2 408 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 FBXO46Q6PJ61 603 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 SLC36A4Q6YBV0 504 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 GLDNQ6ZMI3 551 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF813Q6ZN06 617 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 OR2W3Q7Z3T1 314 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SZRD1Q7Z422 152 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TECPR1Q7Z6L1 1165 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 LSRQ86X29 649 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 SULF2Q8IWU5 870 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 PHACTR4Q8IZ21 702 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CPXCR1Q8N123 301 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 HDDC3Q8N4P3 179 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 WDTC1Q8N5D0 677 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 RELL2Q8NC24 303 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 FBXO15Q8NCQ5 510 aaPredicted RBP5.42□□□□□ -1.54
CD44-225ENST00000527326 ZNF248Q8NDW4 579 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CCDC54Q8NEL0 328 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 DBF4BQ8NFT6 615 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SEMA6DQ8NFY4 1073 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 OR56B1Q8NGI3 324 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 BBS10Q8TAM1 723 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 PROKR1Q8TCW9 393 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 WFIKKN2Q8TEU8 576 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 HSD17B8Q92506 261 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 CORO2AQ92828 525 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TNFRSF14Q92956 283 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 MR1Q95460 341 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 GAL3ST3Q96A11 431 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 TM4SF18Q96CE8 201 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 DYNLL2Q96FJ2 89 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 SMARCD1Q96GM5 515 aa5.42□□□□□ -1.54
CD44-225ENST00000527326 KCNC2Q96PR1 638 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms