RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 FAM208BQ5VWN6 2430 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 CDHR4A6H8M9 788 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 ADAM11O75078 769 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 IFNA14P01570 189 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 CELA3AP09093 270 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 PRG2P13727 222 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ADH7P40394 386 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 P2RX1P51575 399 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 RGS8P57771 180 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 PPIAP62937 165 aaKnown RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 TOMM34Q15785 309 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 LCN8Q6JVE9 175 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ENPP6Q6UWR7 440 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ARSKQ6UWY0 536 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 YTHDF3Q7Z739 585 aaKnown RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 RBM45Q8IUH3 476 aaKnown RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 CMIPQ8IY22 773 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 FAM86B1Q8N7N1 296 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 FADS6Q8N9I5 356 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ZFP62Q8NB50 900 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 FAM71CQ8NEG0 241 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 OR4D11Q8NGI4 311 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 OIT3Q8WWZ8 545 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ASB9Q96DX5 294 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 WBP1Q96G27 269 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 HSH2DQ96JZ2 352 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ZNF703Q9H7S9 590 aaPredicted RBP12.48□□□□□ -0.41
CD44-224ENST00000526669 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 ACTR3BQ9P1U1 418 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 POMPQ9Y244 141 aa12.48□□□□□ -0.41
CD44-224ENST00000526669 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ACOT7O00154 380 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 TFECO14948 347 aaPredicted RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 SUV39H1O43463 412 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 CIB2O75838 187 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 TRAPPC6AO75865 159 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 WISP2O76076 250 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 STAMBPO95630 424 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 LGI1O95970 557 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ZNF24P17028 368 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 HK1P19367 917 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 OR1E2P47887 323 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 SELENOWP63302 87 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 FOXK1P85037 733 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ALDH6A1Q02252 535 aaKnown RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 EPS8Q12929 822 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 FLOT2Q14254 428 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 NRF1Q16656 503 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 YRDCQ86U90 279 aaKnown RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 CARM1Q86X55 608 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 BHLHE22Q8NFJ8 381 aaPredicted RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 OR5M1Q8NGP8 315 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 PROX1Q92786 737 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 LRGUKQ96M69 825 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 NPAS1Q99742 590 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ARHGDIGQ99819 225 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 DEFB127Q9H1M4 99 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 MUC13Q9H3R2 512 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ARMC7Q9H6L4 198 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 GORASP2Q9H8Y8 452 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 CTPS2Q9NRF8 586 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 KLHL28Q9NXS3 571 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 RPS6KA6Q9UK32 745 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 ICAM5Q9UMF0 924 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
CD44-224ENST00000526669 SH3GLB1Q9Y371 365 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
CD44-224ENST00000526669 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 TCRBV5S2A0A599 114 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 ACOT8O14734 319 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 PRKD3O94806 890 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 NQO1P15559 274 aaKnown RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 ENDOUP21128 410 aaKnown RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 DPP4P27487 766 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 MSX1P28360 303 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 CBFBQ13951 182 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 NPTX1Q15818 432 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 IFI44LQ53G44 452 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 RPUSD3Q6P087 351 aaKnown RBP12.46□□□□□ -0.41
CD44-224ENST00000526669 FAM180AQ6UWF9 173 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 DEF8Q6ZN54 512 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 SLC22A16Q86VW1 577 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 SPATA24Q86W54 205 aa12.46□□□□□ -0.41
CD44-224ENST00000526669 GRAMD2AQ8IUY3 354 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms