RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 B3GALT5-AS1P59052 145 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 PLAURQ03405 335 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 SKP2Q13309 424 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 VASNQ6EMK4 673 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ARPINQ7Z6K5 226 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 IFNEQ86WN2 208 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 VRK2Q86Y07 508 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 SLC30A8Q8IWU4 369 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 SLC15A3Q8IY34 581 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ZZZ3Q8IYH5 903 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 TOR1AIP2Q8NFQ8 470 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 OR5W2Q8NH69 310 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 FAM57AQ8TBR7 257 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 GPR119Q8TDV5 335 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 SARAFQ96BY9 339 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ARSGQ96EG1 525 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF583Q96ND8 569 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 PIF1Q9H611 641 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 CMTM6Q9NX76 183 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 TNFRSF10DQ9UBN6 386 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 ANGPT4Q9Y264 503 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 RPH3AQ9Y2J0 694 aaPredicted RBP11.72□□□□□ -0.53
SMPD1-202ENST00000526280 AP3M1Q9Y2T2 418 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 HIVEP3Q5T1R4 2406 aa11.72□□□□□ -0.53
SMPD1-202ENST00000526280 UBR5O95071 2799 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 C7orf72A4D263 438 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 PRRG2O14669 202 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 BCKDKO14874 412 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CYP7B1O75881 506 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ACTL6AO96019 429 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 LINGO3P0C6S8 592 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 PABPC4LP0CB38 370 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CHMP24386 653 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CPA2P48052 419 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 EEF1A1P68104 462 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 KCNC4Q03721 635 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CRYZQ08257 329 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 LARS2Q15031 903 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ZSWIM7Q19AV6 140 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 VMACQ2NL98 169 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 GXYLT1Q4G148 440 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 LIN52Q52LA3 116 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 KRT73Q86Y46 540 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 DOLPP1Q86YN1 238 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CNOT9Q92600 299 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 REXO5Q96IC2 774 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF607Q96SK3 696 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 TIMP4Q99727 224 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 RSPO3Q9BXY4 272 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 UGT2B28Q9BY64 529 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 EXOSC3Q9NQT5 275 aaKnown RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 MED17Q9NVC6 651 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ACAD8Q9UKU7 415 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 VDAC3Q9Y277 283 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF443Q9Y2A4 671 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CHST2Q9Y4C5 530 aa11.71□□□□□ -0.53
SMPD1-202ENST00000526280 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
SMPD1-202ENST00000526280 CDHR4A6H8M9 788 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 FAM47E-STBD1D6RA91 191 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 LINC01387J3KSC0 135 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 GCM2O75603 506 aaPredicted RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 NUDT14O95848 222 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 TPOP07202 933 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 AQP1P29972 269 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 PCGF2P35227 344 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 GCKP35557 465 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 CA7P43166 264 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 SLC7A2P52569 658 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 PSME3P61289 254 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 CBFBQ13951 182 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 TOMM34Q15785 309 aaPredicted RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 C3AR1Q16581 482 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 EMC4Q5J8M3 183 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF311Q5JNZ3 666 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 DCST1Q5T197 706 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 WLSQ5T9L3 541 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 RAET1LQ5VY80 246 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 ERICH5Q6P6B1 374 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 AAGABQ6PD74 315 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF836Q6ZNA1 936 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 GRAMD2AQ8IUY3 354 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 CLIP4Q8N3C7 705 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 GTPBP8Q8N3Z3 284 aaPredicted RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 TMCO5AQ8N6Q1 288 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 OR5M1Q8NGP8 315 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 UTP4Q969X6 686 aaKnown RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 RELTQ969Z4 430 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms