RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 C5orf63A6NC05 138 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 GAGE12JA6NER3 117 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 B4DSR2 109 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 TGM6O95932 706 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 ACTL6AO96019 429 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 TACSTD2P09758 323 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 GDF1P27539 372 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 FOXN2P32314 431 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 PIGAP37287 484 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 PSMB10P40306 273 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 RAD52P43351 418 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 FKBP3Q00688 224 aaKnown RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 RBMS2Q15434 407 aaKnown RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 DCST1Q5T197 706 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 LEG1Q6P5S2 330 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 RBMS3Q6XE24 437 aaKnown RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 NT5DC3Q86UY8 548 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 LRRC49Q8IUZ0 686 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 CDKL3Q8IVW4 592 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 HEXDCQ8WVB3 486 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 ABTB1Q969K4 478 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 RERGQ96A58 199 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-203ENST00000524927 COQ8BQ96D53 544 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 VMP1Q96GC9 406 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 DCUN1D1Q96GG9 259 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 TMEM68Q96MH6 324 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 SMC3Q9UQE7 1217 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 TTLL3Q9Y4R7 772 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 IKBKGQ9Y6K9 419 aa6.01□□□□□ -1.45
NEDD8-203ENST00000524927 EXPH5Q8NEV8 1989 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 CGB1A6NKQ9 187 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 AGAP14A8MT82 685 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 EMC8O43402 210 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 NDUFS3O75489 264 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 CDC123O75794 336 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 TRAPPC6AO75865 159 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 C1QAP02745 245 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 MMP2P08253 660 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 PRSS56P0CW18 603 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 KRT3P12035 628 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 ZNF182P17025 639 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 PTNP21246 168 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 IL2RGP31785 369 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 DCTDP32321 178 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 PIGHQ14442 188 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 BECN1Q14457 450 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 PXDC1Q5TGL8 231 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 MORN5Q5VZ52 161 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 OPN5Q6U736 354 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 TMCO3Q6UWJ1 677 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 GRAMD2AQ8IUY3 354 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 CEP57L1Q8IYX8 460 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 RCOR2Q8IZ40 523 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 C2orf73Q8N5S3 287 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 OR2L3Q8NG85 312 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 CCDC47Q96A33 483 aaKnown RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 TMIGD2Q96BF3 282 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 LRRC58Q96CX6 371 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 OR2A5Q96R48 311 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 CENPOQ9BU64 300 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 C1QTNF5Q9BXJ0 243 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 BPESC1Q9GZL8 116 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 ACTR6Q9GZN1 396 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 ISCUQ9H1K1 167 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 TRABDQ9H4I3 376 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 DHX35Q9H5Z1 703 aaKnown RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 RANGRFQ9HD47 186 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 FANCFQ9NPI8 374 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 RBM22Q9NW64 420 aaKnown RBP eCLIP6□□□□□ -1.45
NEDD8-203ENST00000524927 ZNF223Q9UK11 482 aaPredicted RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 RUVBL2Q9Y230 463 aaKnown RBP6□□□□□ -1.45
NEDD8-203ENST00000524927 SLC6A5Q9Y345 797 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 FKBP7Q9Y680 259 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 SESN1Q9Y6P5 492 aa6□□□□□ -1.45
NEDD8-203ENST00000524927 GOLGA6L10A6NI86 522 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 GOLGA6L19H0YKK7 550 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 CLDN34H7C241 214 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 LIN7AO14910 233 aaPredicted RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 LY6HO94772 140 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 SYF2O95926 243 aaKnown RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 JAK1P23458 1154 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 TLX1P31314 330 aaPredicted RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 ME1P48163 572 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 CDK9P50750 372 aaKnown RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 RELAQ04206 551 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 PPIDQ08752 370 aaKnown RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 C2orf68Q2NKX9 166 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 DNAJC21Q5F1R6 531 aaKnown RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 SLC22A10Q63ZE4 541 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 STAC2Q6ZMT1 411 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 HAPLN4Q86UW8 402 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 TEX45Q8NA69 505 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 HUS1BQ8NHY5 278 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 GABPB2Q8TAK5 448 aaPredicted RBP5.99□□□□□ -1.45
NEDD8-203ENST00000524927 MUC7Q8TAX7 377 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 PAQR8Q8TEZ7 354 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 SGCDQ92629 289 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 SNAPC3Q92966 411 aa5.99□□□□□ -1.45
NEDD8-203ENST00000524927 SLC25A28Q96A46 364 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms