RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PRKD3O94806 890 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 FESP07332 822 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 C8BP07358 591 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 PPIAP62937 165 aaKnown RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 SELENOWP63302 87 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 KCNJ10P78508 379 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 TLE1Q04724 770 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 FOXO1Q12778 655 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 SKP2Q13309 424 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 LARS2Q15031 903 aaKnown RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 NPTX1Q15818 432 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 NRF1Q16656 503 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 CBLN3Q6UW01 205 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 TSEN54Q7Z6J9 526 aaKnown RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 LSRQ86X29 649 aaPredicted RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 AQP12AQ8IXF9 295 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 ADGRG5Q8IZF4 528 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 PHOSPHO1Q8TCT1 267 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 FAR1Q8WVX9 515 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 TMEM41AQ96HV5 264 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 TPD52L3Q96J77 140 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 SAMD4AQ9UPU9 718 aaKnown RBP13.95□□□□□ -0.18
LSM1-203ENST00000520755 SHANK1Q9Y566 2161 aa13.95□□□□□ -0.18
LSM1-203ENST00000520755 NPIPA5E9PKD4 350 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 M0R3H8 397 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 NDUFB5O43674 189 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 GMNNO75496 209 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 GLSO94925 669 aaPredicted RBP13.94□□□□□ -0.18
LSM1-203ENST00000520755 LGI1O95970 557 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 CSTAP01040 98 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 RFPL3SP0C7P2 107 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 UBTFL6P0CB48 400 aaPredicted RBP13.94□□□□□ -0.18
LSM1-203ENST00000520755 UBL4AP11441 157 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 PRG2P13727 222 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 MST1P26927 711 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 ZNF136P52737 540 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 ACTR3P61158 418 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 OR5M10Q6IEU7 315 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 SLC22A16Q86VW1 577 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 GRAMD2AQ8IUY3 354 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 CMIPQ8IY22 773 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 TMEM251Q8N6I4 163 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 OR1J4Q8NGS1 313 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 SLC26A7Q8TE54 656 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 RASSF5Q8WWW0 418 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 NR4A3Q92570 626 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 GNRHR2Q96P88 292 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 TRIM15Q9C019 465 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 RPS6KA6Q9UK32 745 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 NPIPA1Q9UND3 350 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 SLC35A3Q9Y2D2 325 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 KIAA1549Q9HCM3 1950 aa13.94□□□□□ -0.18
LSM1-203ENST00000520755 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 AP3D1O14617 1153 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 SNPHO15079 494 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 ZNF264O43296 627 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 TPST2O60704 377 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 SEMA7AO75326 666 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 IFNA14P01570 189 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 GKN3PP0CG01 181 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 ELAVL4P26378 380 aaKnown RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 GDF1P27539 372 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 MAGEA5P43359 124 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 OR1E2P47887 323 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 TOMM20Q15388 145 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 IQCCQ4KMZ1 466 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 EIPR1Q53HC9 387 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 ZNF324BQ6AW86 544 aaPredicted RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 TIGD3Q6B0B8 471 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 TSPYL5Q86VY4 417 aaPredicted RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 RBM45Q8IUH3 476 aaKnown RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 FADS6Q8N9I5 356 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 DUSP19Q8WTR2 217 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 SLCO4A1Q96BD0 722 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 SH3YL1Q96HL8 342 aaPredicted RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 LRGUKQ96M69 825 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 DEFB127Q9H1M4 99 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 ZNF703Q9H7S9 590 aaPredicted RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 EXOSC3Q9NQT5 275 aaKnown RBP13.93□□□□□ -0.18
LSM1-203ENST00000520755 BAG5Q9UL15 447 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 ICAM5Q9UMF0 924 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 CARD8Q9Y2G2 431 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
LSM1-203ENST00000520755 DHRS12A0PJE2 317 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 GMFGO60234 142 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 CDC40O60508 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
LSM1-203ENST00000520755 WISP2O76076 250 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 CELA3AP09093 270 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 HTR2AP28223 471 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 ACAA2P42765 397 aaKnown RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 VLDLRP98155 873 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 HOXC5Q00444 222 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms