RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ASXL3Q9C0F0 2248 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 DOCK9Q9BZ29 2069 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 LINC00854A0A1B0GVQ3 168 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 A8MU76 341 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 PLD2O14939 933 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 LYRM1O43325 122 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 SSX4O60224 188 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 RNGTTO60942 597 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ALX3O95076 343 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 DHFRP00374 187 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 IGHA1P01876 353 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TP53P04637 393 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 MSL3P1P0C860 447 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 PSKH1P11801 424 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 MPIP34949 423 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 AHRP35869 848 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 RAB28P51157 221 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 CLDN20P56880 219 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 CLDN2P57739 230 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ARPC4P59998 168 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 STXBP1P61764 594 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TLE3Q04726 772 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 CHRNEQ04844 493 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 DMPKQ09013 629 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 FOXD4Q12950 439 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 SLAMF1Q13291 335 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 LY6DQ14210 128 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 KRT33BQ14525 404 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 RTP5Q14D33 572 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 SYPL1Q16563 259 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 PRSS53Q2L4Q9 553 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 WSCD2Q2TBF2 565 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 PAMR1Q6UXH9 720 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ZER1Q7Z7L7 766 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 LUZP2Q86TE4 346 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 RANBP3LQ86VV4 465 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 LRRC28Q86X40 367 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 GPALPP1Q8IXQ4 340 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 Q8N9G6 341 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 DUSP18Q8NEJ0 188 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ATP6V1C2Q8NEY4 427 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 OR2T33Q8NG76 320 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 OR52P1PQ8NH57 321 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 SLC9A6Q92581 669 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TTC9Q92623 222 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 AKAP1Q92667 903 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ARRDC3Q96B67 414 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TRMT61AQ96FX7 289 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 KLHDC7BQ96G42 594 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 MRPL48Q96GC5 212 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 COX14Q96I36 57 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 IL17FQ96PD4 163 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 NEDD4LQ96PU5 975 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TIMM29Q9BSF4 260 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TMEM43Q9BTV4 400 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ACAT2Q9BWD1 397 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 YIPF2Q9BWQ6 316 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 HDAC8Q9BY41 377 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 ABCG4Q9H172 646 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 MMP28Q9H239 520 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 FN3KQ9H479 309 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 GLIPR2Q9H4G4 154 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TRIM36Q9NQ86 728 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 MAN2C1Q9NTJ4 1040 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 C14orf105Q9NVL8 296 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TEX10Q9NXF1 929 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 EXOGQ9Y2C4 368 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TMEM98Q9Y2Y6 226 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 NOX1Q9Y5S8 564 aa8.03□□□□□ -1.12
CTNNA1-223ENST00000520520 TDRD6O60522 2096 aaKnown RBP8.02□□□□□ -1.12
CTNNA1-223ENST00000520520 MGAQ8IWI9 3026 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 TEX51A0A1B0GUA7 166 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 OR6C70A6NIJ9 312 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 AGRPO00253 132 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 RTCAO00442 366 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 GABRPO00591 440 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 KLK10O43240 276 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 TMPRSS11DO60235 418 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 STX11O75558 287 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 PCDH8O95206 1070 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 SERPIND1P05546 499 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 CHRM4P08173 479 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 ADRA2AP08913 450 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 ALPPL2P10696 532 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 PEPDP12955 493 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 CMPK1P30085 196 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 PKLRP30613 574 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 RRAS2P62070 204 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 ACTC1P68032 377 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 ACTA1P68133 377 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 CSNK1G2P78368 415 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 EFNB1P98172 346 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 CD83Q01151 205 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 FABP5Q01469 135 aa8.02□□□□□ -1.13
CTNNA1-223ENST00000520520 FAPQ12884 760 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms