RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SMIM23A6NLE4 172 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 A8MXK9 166 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM25EA8MYX2 175 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 LMO7DNF2Z398 122 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 H3BMQ9 156 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8MH3BSY2 632 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TM9SF1O15321 606 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SIGLEC5O15389 551 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 MLNRO43193 412 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC7A4O43246 635 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SNAP91O60641 907 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A9O60656 530 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPAG7O75391 227 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 LRCH4O75427 683 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 H6PDO95479 791 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FGF19O95750 216 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PIGRP01833 764 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 APOEP02649 317 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYP11B1P15538 503 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A6P19224 532 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PRKACBP22694 351 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PHBP35232 272 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A3P35503 534 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A5P35504 534 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 NUDT1P36639 197 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMD8P48556 350 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 EIF2B2P49770 351 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CRYBA2P53672 197 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PEX3P56589 373 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 C21orf59P57076 290 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 STX1BP61266 288 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FKBP1BP68106 108 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PAX8Q06710 450 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 WASHC5Q12768 1159 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 GPR50Q13585 617 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CEACAM7Q14002 265 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PDK1Q15118 436 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PKN2Q16513 984 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 LPAL2Q16609 132 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 DUSP7Q16829 419 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 RGS21Q2M5E4 152 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SNAI3Q3KNW1 292 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 LRIT3Q3SXY7 679 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC58Q4VC31 144 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF776Q68DI1 518 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TWF2Q6IBS0 349 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PODNL1Q6PEZ8 512 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC137Q6PK04 289 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCBE1Q6UXH8 406 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 C4orf22Q6V702 233 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 C17orf107Q6ZR85 190 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDHR3Q6ZTQ4 885 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 MIER3Q7Z3K6 550 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM131BQ86XD5 332 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PHF13Q86YI8 300 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TDHQ8IZJ6 230 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 MCOLN2Q8IZK6 566 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMCO5AQ8N6Q1 288 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 MINDY2Q8NBR6 621 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FBXL13Q8NEE6 735 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR13C5Q8NGS8 318 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FIBINQ8TAL6 211 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC110Q8TBZ0 833 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CD99L2Q8TCZ2 262 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACER1Q8TDN7 264 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PYDC1Q8WXC3 89 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SEPT8Q92599 483 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 RASL10AQ92737 203 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TAF15Q92804 592 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 STMN2Q93045 179 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ATP6V1E2Q96A05 226 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 C11orf52Q96A22 123 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 C12orf43Q96C57 262 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 BPIFA2Q96DR5 249 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 DCUN1D1Q96GG9 259 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SORT1Q99523 831 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CIB1Q99828 191 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ATF6BQ99941 703 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 LXNQ9BS40 222 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TEKT3Q9BXF9 490 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANKRD60Q9BZ19 345 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FRMD8P1Q9BZ68 369 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 NDEL1Q9GZM8 345 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 MTIF3Q9H2K0 278 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TUBB1Q9H4B7 451 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM124BQ9H5Z6 455 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TDRD3Q9H7E2 651 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 NANOGQ9H9S0 305 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 GPN2Q9H9Y4 310 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A7Q9HAW7 530 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A10Q9HAW8 530 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT1A8Q9HAW9 530 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 FANCEQ9HB96 536 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC38A10Q9HBR0 1119 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PARVAQ9NVD7 372 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 RAB20Q9NX57 234 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 DUS2Q9NX74 493 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM9Q9P0T7 183 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CTSZQ9UBR2 303 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 KCNN3Q9UGI6 736 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms