RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CMPK2Q5EBM0 449 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 LCN8Q6JVE9 175 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 ARSKQ6UWY0 536 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 CYP2R1Q6VVX0 501 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 EIF3MQ7L2H7 374 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 VTCN1Q7Z7D3 282 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 PACS2Q86VP3 889 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 KRT73Q86Y46 540 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 SPPL2CQ8IUH8 684 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 CHERPQ8IWX8 916 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 CMIPQ8IY22 773 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 CISD2Q8N5K1 135 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 OR1J4Q8NGS1 313 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 B4GALNT2Q8NHY0 566 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 POC1BQ8TC44 478 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 CCDC124Q96CT7 223 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 SNRNP40Q96DI7 357 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 C1GALT1C1Q96EU7 318 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 JSRP1Q96MG2 331 aaPredicted RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 OR2B2Q9GZK3 357 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 ZDHHC11Q9H8X9 412 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 EXOSC3Q9NQT5 275 aaKnown RBP8.98□□□□□ -0.97
CLN8-202ENST00000517514 OLAHQ9NV23 265 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 PPP4R1LQ9P1A2 415 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 ACTR3BQ9P1U1 418 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 SEC14L3Q9UDX4 400 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 MAGEL2Q9UJ55 1249 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 POMPQ9Y244 141 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 SLC35A3Q9Y2D2 325 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 MPDZO75970 2070 aa8.98□□□□□ -0.97
CLN8-202ENST00000517514 DNAJC13O75165 2243 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 COL6A6A6NMZ7 2263 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 ANKUB1A6NFN9 424 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 SHISA8B8ZZ34 492 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 GTPBP1O00178 669 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 ETV2O00321 342 aaPredicted RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 SYT5O00445 386 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 GSTA4O15217 222 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 ZNHIT1O43257 154 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 SERPINB7O75635 380 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 PDE9AO76083 593 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 PRKD3O94806 890 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 LYPD3O95274 346 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 RASAL1O95294 804 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 THY1P04216 161 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 PRB1P04280 392 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 HPNP05981 417 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 C8BP07358 591 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 LINGO3P0C6S8 592 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 HPGDP15428 266 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 ENDOUP21128 410 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 PSMA4P25789 261 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 ELAVL4P26378 380 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 MASP1P48740 699 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 CLK3P49761 638 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 RASSF2P50749 326 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 TDGF1P3P51864 188 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 DLX5P56178 289 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 SELENOWP63302 87 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 NFATC3Q12968 1075 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 ELOAQ14241 798 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 LARS2Q15031 903 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 PLPPR5Q32ZL2 321 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 ENPP6Q6UWR7 440 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 FGD2Q7Z6J4 655 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 YRDCQ86U90 279 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 MISPQ8IVT2 679 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 TEX19Q8NA77 164 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 LSM14AQ8ND56 463 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 FAM83FQ8NEG4 500 aaPredicted RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 TOR1AIP2Q8NFQ8 470 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 TNIP2Q8NFZ5 429 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 OR6T1Q8NGN1 323 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 OR5W2Q8NH69 310 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 PHF10Q8WUB8 498 aaKnown RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 ASB9Q96DX5 294 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 SPATA5L1Q9BVQ7 753 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 SDHAF3Q9NRP4 125 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 MED17Q9NVC6 651 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 BOKQ9UMX3 212 aaPredicted RBP8.97□□□□□ -0.97
CLN8-202ENST00000517514 ZNF232Q9UNY5 417 aa8.97□□□□□ -0.97
CLN8-202ENST00000517514 KIAA1549Q9HCM3 1950 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 ANKRD65E5RJM6 399 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 H3BNH8 94 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 FAAHO00519 579 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 CDC40O60508 579 aaKnown RBP eCLIP8.96□□□□□ -0.98
CLN8-202ENST00000517514 CBR3O75828 277 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 CYP7B1O75881 506 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 IGHG3P01860 377 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 IL11P20809 199 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 MSX1P28360 303 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 SRD5A2P31213 254 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 OR1E2P47887 323 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 SUMO3P55854 103 aaPredicted RBP8.96□□□□□ -0.98
CLN8-202ENST00000517514 DSCR4P56555 118 aaPredicted RBP8.96□□□□□ -0.98
CLN8-202ENST00000517514 CCNIQ14094 377 aa8.96□□□□□ -0.98
CLN8-202ENST00000517514 QPRTQ15274 297 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms