RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 ZNF443Q9Y2A4 671 aaPredicted RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 ESPL1Q14674 2120 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 OIP5O43482 229 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 GMFGO60234 142 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 STSP08842 583 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PGCP20142 388 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 CALB2P22676 271 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ADH6P28332 368 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PRKAR1BP31321 381 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 UQCRFS1P47985 274 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 CCR4P51679 360 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 GFRA1P56159 465 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 EEFSECP57772 596 aaKnown RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 PSME3P61289 254 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 EEF1A1P68104 462 aaKnown RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 MXRA7P84157 204 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 CRYZQ08257 329 aaKnown RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 TMEM44Q2T9K0 475 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 NDUFAF6Q330K2 333 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 MRPL2Q5T653 305 aaKnown RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 RAET1LQ5VY80 246 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 VASNQ6EMK4 673 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ENPP6Q6UWR7 440 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ARSKQ6UWY0 536 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 C16orf89Q6UX73 402 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ZNF836Q6ZNA1 936 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 FGD2Q7Z6J4 655 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 HMGN2P46Q86SG4 172 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 VRK2Q86Y07 508 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PM20D2Q8IYS1 436 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 GPR119Q8TDV5 335 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 RASSF5Q8WWW0 418 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 TMEM234Q8WY98 164 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 SFXN2Q96NB2 322 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 PIF1Q9H611 641 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 MED17Q9NVC6 651 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 DNAJB12Q9NXW2 375 aaKnown RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 SPRR3Q9UBC9 169 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 STOML1Q9UBI4 398 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 ACAD8Q9UKU7 415 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 OSGIN2Q9Y236 505 aa10.79□□□□□ -0.68
SNF8-215ENST00000515572 RPH3AQ9Y2J0 694 aaPredicted RBP10.79□□□□□ -0.68
SNF8-215ENST00000515572 ELOVL7A1L3X0 281 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 CCT8L1PA6NM43 557 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 CLDN24A6NM45 220 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 NPIPA2E9PIF3 369 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 NPIPA3F8WFD2 350 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 FAAHO00519 579 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 NME4O00746 187 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 WISP1O95388 367 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 TPOP07202 933 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 LINGO3P0C6S8 592 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 BMP7P18075 431 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 AQP1P29972 269 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 B3GALT5-AS1P59052 145 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 LIPEQ05469 1076 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 QPRTQ15274 297 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.688e-9■■■■□ 21.6
SNF8-215ENST00000515572 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 DHRS4L2Q6PKH6 230 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 CCDC80Q76M96 950 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 ZNF550Q7Z398 422 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 ARMC8Q8IUR7 673 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 MICU2Q8IYU8 434 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 EID3Q8N140 333 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 GTPBP8Q8N3Z3 284 aaPredicted RBP10.78□□□□□ -0.68
SNF8-215ENST00000515572 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 ST8SIA1Q92185 356 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 CNOT9Q92600 299 aaKnown RBP10.78□□□□□ -0.68
SNF8-215ENST00000515572 MRGPRX4Q96LA9 322 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 TIMP4Q99727 224 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 UGT2B28Q9BY64 529 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 ALG2Q9H553 416 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 KLHL28Q9NXS3 571 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 VDAC3Q9Y277 283 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
SNF8-215ENST00000515572 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 A0A1B0GUH1 482 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 OR2M5A3KFT3 312 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 CFAP73A6NFT4 308 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 M0QX08 132 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 WDR1O75083 606 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 BCAS1O75363 584 aaPredicted RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 MFN2O95140 757 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 IFNA14P01570 189 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 HOXD4P09016 255 aaPredicted RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 PEPDP12955 493 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 GABRA1P14867 456 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 CPN1P15169 458 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 922.3 ms