RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 LIME1Q9H400 295 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 RNF122Q9H9V4 155 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 SLCO1B3Q9NPD5 702 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 EXD2Q9NVH0 621 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 DNAJB12Q9NXW2 375 aaKnown RBP11.73□□□□□ -0.53
CDK7-212ENST00000515180 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
CDK7-212ENST00000515180 PACSIN3Q9UKS6 424 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 CLEC4AQ9UMR7 237 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 ZNF175Q9Y473 711 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
CDK7-212ENST00000515180 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 C7orf72A4D263 438 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 A8MXE2 369 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 H3BNH8 94 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 HMGN4O00479 90 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 KLF11O14901 512 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 ZNF264O43296 627 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 BCAS1O75363 584 aaPredicted RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 CTAG2O75638 210 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 AK1P00568 194 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 UBL4AP11441 157 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 RAC1P63000 192 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 FAM27E3Q08E93 113 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 ZNF141Q15928 474 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 PDCD4Q53EL6 469 aaKnown RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 GPAT3Q53EU6 434 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 OR2A2Q6IF42 318 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 TYW3Q6IPR3 259 aaKnown RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 DNAJC14Q6Y2X3 702 aaPredicted RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 KIF18BQ86Y91 864 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 LILRA2Q8N149 483 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 OR9I1Q8NGQ6 314 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 OR2V1Q8NHB1 315 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 FAM222BQ8WU58 562 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 ZBTB18Q99592 522 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 THUMPD3Q9BV44 507 aaKnown RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 POLDIP3Q9BY77 421 aaKnown RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 ZNF350Q9GZX5 532 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 QRSL1Q9H0R6 528 aaKnown RBP11.72□□□□□ -0.53
CDK7-212ENST00000515180 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 HHATLQ9HCP6 504 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 SLC6A13Q9NSD5 602 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 WDR45Q9Y484 360 aa11.72□□□□□ -0.53
CDK7-212ENST00000515180 A6NNC1 897 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 UBDO15205 165 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 SLC22A3O75751 556 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 CSTAP01040 98 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 CGAP01215 116 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 CRHP06850 196 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 UBTFL6P0CB48 400 aaPredicted RBP11.71□□□□□ -0.53
CDK7-212ENST00000515180 IDO1P14902 403 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 PRKCAP17252 672 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 KHKP50053 298 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 CHRNEQ04844 493 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 QPRTQ15274 297 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 POU4F3Q15319 338 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 SYPL1Q16563 259 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 GTDC1Q4AE62 458 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 COX20Q5RI15 118 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 ATAD3BQ5T9A4 648 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 HBMQ6B0K9 141 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 EPGNQ6UW88 154 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 FRRS1Q6ZNA5 592 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 ANKFN1Q8N957 763 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 ZNF610Q8N9Z0 462 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 OSTF1Q92882 214 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 KLHL15Q96M94 604 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 EBF4Q9BQW3 602 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 NMUR2Q9GZQ4 415 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 RASSF1Q9NS23 344 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 STOML1Q9UBI4 398 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 ADGRG4Q8IZF6 3080 aa11.71□□□□□ -0.53
CDK7-212ENST00000515180 DCHS2Q6V1P9 2916 aa11.71□□□□□ -0.54
CDK7-212ENST00000515180 LRBAP50851 2863 aa11.71□□□□□ -0.54
CDK7-212ENST00000515180 POLQO75417 2590 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 FAM221AA4D161 298 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 CLDN24A6NM45 220 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 MSTNO14793 375 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 ADAMDEC1O15204 470 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 KIAA0513O60268 411 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 EIF4E2O60573 245 aaKnown RBP11.7□□□□□ -0.54
CDK7-212ENST00000515180 SYNGR4O95473 234 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 H6PDO95479 791 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 EPXP11678 715 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 PEX19P40855 299 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 EIF1P41567 113 aaKnown RBP11.7□□□□□ -0.54
CDK7-212ENST00000515180 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
CDK7-212ENST00000515180 SORDQ00796 357 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 SKP2Q13309 424 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 GUSBP1Q15486 140 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 TMEM176BQ3YBM2 270 aaPredicted RBP11.7□□□□□ -0.54
CDK7-212ENST00000515180 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 ZNF619Q8N2I2 560 aa11.7□□□□□ -0.54
CDK7-212ENST00000515180 GLB1L3Q8NCI6 653 aaPredicted RBP11.7□□□□□ -0.54
CDK7-212ENST00000515180 TOR1AIP2Q8NFQ8 470 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms