RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SMC3Q9UQE7 1217 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 TEX264Q9Y6I9 313 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 CLCA3PQ9Y6N3 262 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 DOCK9Q9BZ29 2069 aa1.06□□□□□ -2.24
PDGFC-208ENST00000512711 COLCA2A8K830 154 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 FMO6PO60774 539 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 SLC4A1P02730 911 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 CSF2P04141 144 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 MRPL3P09001 348 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 GSTT2P0CG29 244 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 GSTT2BP0CG30 244 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 THRBP10828 461 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 PRDX3P30048 256 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 TNNT3P45378 269 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 GNPDA1P46926 289 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 SRP54P61011 504 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 FUT7Q11130 342 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 PPP1R8Q12972 351 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 RSPO1Q2MKA7 263 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 CCDC57Q2TAC2 916 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 SMU1Q2TAY7 513 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 CASC10Q5T4H9 136 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 IL23RQ5VWK5 629 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 C11orf88Q6PI97 169 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 Q6ZR03 302 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 TOM1L2Q6ZVM7 507 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 RALGPS2Q86X27 583 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 MFSD6LQ8IWD5 586 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 UNC45BQ8IWX7 931 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 LINC01561Q8N1V8 128 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 M1APQ8TC57 530 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 PAQR8Q8TEZ7 354 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 DNAJA4Q8WW22 397 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 STARD8Q92502 1023 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 SNX21Q969T3 373 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 SLC25A36Q96CQ1 311 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 CELF6Q96J87 481 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 MS4A14Q96JA4 679 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 ELMO2Q96JJ3 720 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 FAM210BQ96KR6 192 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 MCHR1Q99705 422 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 POLR3FQ9H1D9 316 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 PPDPFQ9H3Y8 114 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 ZWILCHQ9H900 591 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 MARCOQ9UEW3 520 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 DCDC2Q9UHG0 476 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 DHX57Q6P158 1386 aaKnown RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 PLEKHH1Q9ULM0 1364 aa1.05□□□□□ -2.24
PDGFC-208ENST00000512711 COL27A1Q8IZC6 1860 aaPredicted RBP1.05□□□□□ -2.24
PDGFC-208ENST00000512711 A0A0G2JLM5 398 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 A0A1B0GWB2 263 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 H3BTX0 84 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 N4BP1O75113 896 aaKnown RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 KIAA0754O94854 1291 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 ADRB3P13945 408 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 CELP19835 753 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 EFNB2P52799 333 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 SSTP61278 116 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 TGFBR3Q03167 851 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 TSTA3Q13630 321 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 ATXN7L3Q14CW9 347 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 PSG5Q15238 335 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 CHRFAM7AQ494W8 412 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 RABGAP1LQ5R372 815 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 OR8G2PQ6IF36 304 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 IYDQ6PHW0 289 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 SLC25A34Q6PIV7 304 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 UNC5DQ6UXZ4 953 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF621Q6ZSS3 439 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 CNTN4Q8IWV2 1026 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 TTC5Q8N0Z6 440 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 NEK11Q8NG66 645 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 UCN3Q969E3 161 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 TIMD4Q96H15 378 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF578Q96N58 590 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 ZNF641Q96N77 438 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 CITED1Q99966 193 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 NRIP2Q9BQI9 281 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 PLA2G12AQ9BZM1 189 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 NACA2Q9H009 215 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 SLC25A51Q9H1U9 297 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 TRPV5Q9NQA5 729 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 HOMER3Q9NSC5 361 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 BTNL2Q9UIR0 455 aa1.04□□□□□ -2.24
PDGFC-208ENST00000512711 NUP214P35658 2090 aaPredicted RBP1.04□□□□□ -2.24
PDGFC-208ENST00000512711 PIKFYVEQ9Y2I7 2098 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 SHANK1Q9Y566 2161 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 IGLV2-18A0A075B6J9 118 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 KIR2DS1A0A191URI9 304 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 FAM74A7A6NL05 159 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 E9PMD0 336 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 H3BMQ9 156 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 SGK494L7N484 410 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 LAD1O00515 517 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 VEGFDO43915 354 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 B4GALT2O60909 372 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 SPAG7O75391 227 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 ALPPP05187 535 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms