RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 C3P1Q6ZMU1 363 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 RBM44Q6ZP01 1051 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CLEC20AQ6ZU45 233 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 MOB3CQ70IA8 216 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 UNC93AQ86WB7 457 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SERPINA9Q86WD7 417 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TDRPQ86YL5 185 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR4N4Q8N0Y3 316 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CENPSQ8N2Z9 138 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 PARP8Q8N3A8 854 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEX26Q8N6G2 289 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR5T2Q8NGG2 359 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR1L4Q8NGR5 311 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 DYNC2LI1Q8TCX1 351 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 ABHD5Q8WTS1 349 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 FGF13Q92913 245 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 WBP2Q969T9 261 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMARCD1Q96GM5 515 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 MTERF1Q99551 399 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 NRSN2Q9GZP1 204 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 PCBD2Q9H0N5 130 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 WDR54Q9H977 334 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 MLXIPLQ9NP71 852 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CD320Q9NPF0 282 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIRT7Q9NRC8 400 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 USE1Q9NZ43 259 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 STOX2Q9P2F5 926 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 OPN4Q9UHM6 478 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 USP22Q9UPT9 525 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 ICKQ9UPZ9 632 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 GSTK1Q9Y2Q3 226 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 POLR3HQ9Y535 204 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 FKBP7Q9Y680 259 aa4.65□□□□□ -1.66
TRAPPC11-208ENST00000511955 CLUHO75153 1309 aa4.65□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3DA0A087WVF3 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3IA0A087WXS9 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3EA0A087X179 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 DCDC2BA2VCK2 349 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPED1A4D0V7 1026 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3FA6NER0 549 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 RFXANKO14593 260 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRIM24O15164 1050 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 CFLARO15519 480 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 PMPCBO75439 489 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 SRP72O76094 671 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 CHRNGP07510 517 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM228BP0C875 321 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 HMGA1P17096 107 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 AMD1P17707 334 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 KDELR2P33947 212 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 RPL5P46777 297 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 RGRP47804 291 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 HCAR3P49019 387 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 CDK9P50750 372 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 MVDP53602 400 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC37A1P57057 533 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 HERVK_113P63132 956 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ERVK-25P63136 954 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 EGR4Q05215 589 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ADIGQ0VDE8 80 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TAF10Q12962 218 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 AQP6Q13520 282 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 IRF4Q15306 451 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TOMM34Q15785 309 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 IMPG1Q17R60 797 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 REEP3Q6NUK4 255 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM180AQ6UWF9 173 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 GDPD4Q6W3E5 623 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAD9BQ6WBX8 426 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC16A9Q7RTY1 509 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRUNE1Q86TP1 453 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 PIGZQ86VD9 579 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ANKRD46Q86W74 232 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 RALGPS2Q86X27 583 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 DCP2Q8IU60 420 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ERI1Q8IV48 349 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 STHQ8IWL8 128 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 GPALPP1Q8IXQ4 340 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM71AQ8IYT1 594 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ADGRG5Q8IZF4 528 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 NLGN4XQ8N0W4 816 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF561Q8N587 486 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 HORMAD2Q8N7B1 307 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 LMNTD1Q8N9Z9 388 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TERB1Q8NA31 727 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 Q8NA96 180 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM35BQ8NCS4 154 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR9G4Q8NGQ1 327 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 SHKBP1Q8TBC3 707 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 PHOSPHO1Q8TCT1 267 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 PROKR1Q8TCW9 393 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 NETO1Q8TDF5 533 aa4.64□□□□□ -1.67
TRAPPC11-208ENST00000511955 ALG3Q92685 438 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms