RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CTBP2P56545 445 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 IL5RAQ01344 420 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 CD47Q08722 323 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 SKP2Q13309 424 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 APOFQ13790 326 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 C6orf141Q5SZD1 244 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 NDUFAF7Q7L592 441 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 CDK20Q8IZL9 346 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 ARMC10Q8N2F6 343 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 POGLUT1Q8NBL1 392 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 NLGN4YQ8NFZ3 816 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-209ENST00000511426 TSPAN14Q8NG11 270 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 PHOSPHO1Q8TCT1 267 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 TMEM239Q8WW34 195 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 LMF1Q96S06 567 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 DEFB126Q9BYW3 111 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 MED31Q9Y3C7 131 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 PCDHGB5Q9Y5G0 923 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 CACNA1HO95180 2353 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 NSG1A0A0A6YYJ2 146 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 A0A1B0GWA3 101 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TRIM64CA6NLI5 447 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 KLF4O43474 513 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 NDUFB5O43674 189 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 LYPD3O95274 346 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CLPTM1O96005 669 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 LINGO3P0C6S8 592 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TCN2P20062 427 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 FUT4P22083 530 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 EVI2BP34910 448 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 HLCSP50747 726 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 SUMO3P55854 103 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 HOXC5Q00444 222 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 BTBD16Q32M84 506 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 IGF2-ASQ6U949 168 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 NKAIN4Q8IVV8 208 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 DEFB124Q8NES8 71 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CT55Q8WUE5 264 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 RNF138Q8WVD3 245 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TEX12Q9BXU0 123 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 NRSN2Q9GZP1 204 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CDC14CA4D256 554 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 STMND1H3BQB6 276 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 FADS1O60427 444 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 BCAS1O75363 584 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 NADKO95544 446 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 SMIM18P0DKX4 95 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CEACAM1P13688 526 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 POU2F1P14859 743 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 PRKCDQ05655 676 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CDK5R2Q13319 367 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 MAD2L1BPQ15013 274 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 C3orf38Q5JPI3 329 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 SLX4IPQ5VYV7 408 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM81Q6P7N7 255 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 LINC00114Q6XXX2 140 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TIPARPQ7Z3E1 657 aaKnown RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 NRMQ8IXM6 262 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 OR11G2Q8NGC1 345 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 C8orf44Q96CB5 159 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 IP6K3Q96PC2 410 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 SECISBP2Q96T21 854 aaKnown RBP13.95□□□□□ -0.18
SCLT1-209ENST00000511426 SLC25A19Q9HC21 320 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 CCNB1IP1Q9NPC3 277 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 IMPAD1Q9NX62 359 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 SOCS6O14544 535 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 PRKNO60260 465 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-209ENST00000511426 ANGPTL1O95841 491 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 HPP00738 406 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 PGCP20142 388 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 CRHBPP24387 322 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 EPHA2P29317 976 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 NR1H2P55055 460 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 FOXL2P58012 376 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 CD226Q15762 336 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 BROXQ5VW32 411 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 KIRREL2Q6UWL6 708 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 TMPRSS11FQ6ZWK6 438 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 PRR22Q8IZ63 422 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 FAM81AQ8TBF8 368 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 TEX47Q8TBZ9 253 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM255BQ8WV15 326 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 OSTF1Q92882 214 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 ARSGQ96EG1 525 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 RNF31Q96EP0 1072 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 IL20Q9NYY1 176 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 FLRT3Q9NZU0 649 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms