RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ZCCHC12Q6PEW1 402 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 C6orf89Q6UWU4 347 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 C3P1Q6ZMU1 363 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 NUP54Q7Z3B4 507 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 VTCN1Q7Z7D3 282 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 CALHM3Q86XJ0 350 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 MEX3DQ86XN8 651 aaKnown RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 SPPL2CQ8IUH8 684 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 LACC1Q8IV20 430 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 P3H2Q8IVL5 708 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 PGAM4Q8N0Y7 254 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 CADM2Q8N3J6 435 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 FBXW8Q8N3Y1 598 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 TMEM251Q8N6I4 163 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 FAM86B1Q8N7N1 296 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 WDSUB1Q8N9V3 476 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 C11orf65Q8NCR3 313 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 CHDHQ8NE62 594 aaPredicted RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 C7orf57Q8NEG2 295 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 OR8J3Q8NGG0 315 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 OR4D11Q8NGI4 311 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 PAQR8Q8TEZ7 354 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 WDR60Q8WVS4 1066 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 HOXB13Q92826 284 aaPredicted RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 TAMM41Q96BW9 452 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 TMCO6Q96DC7 493 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 SNRNP40Q96DI7 357 aaKnown RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 ZNF597Q96LX8 424 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 TRNT1Q96Q11 434 aaKnown RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 UBL7Q96S82 380 aaPredicted RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 G6PC3Q9BUM1 346 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 CADM1Q9BY67 442 aaKnown RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 TTTY12Q9BZ98 90 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 ZNF350Q9GZX5 532 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 RAD21L1Q9H4I0 556 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 SH2D2AQ9NP31 389 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 SPAG4Q9NPE6 437 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 ASF1BQ9NVP2 202 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 TMEM45AQ9NWC5 275 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 ALKBH4Q9NXW9 302 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 SEC14L3Q9UDX4 400 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 DKKL1Q9UK85 242 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 MRTO4Q9UKD2 239 aaKnown RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 KLF13Q9Y2Y9 288 aaPredicted RBP4.92□□□□□ -1.62
PROM1-211ENST00000511153 WIF1Q9Y5W5 379 aa4.92□□□□□ -1.62
PROM1-211ENST00000511153 MPDZO75970 2070 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 SERINC4A6NH21 518 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 AGAP5A6NIR3 686 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 EIF4E1BA6NMX2 242 aaKnown RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 H0YC42 278 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ADAM10O14672 748 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ASNA1O43681 348 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 TPST2O60704 377 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 EPPINO95925 133 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 UBL4AP11441 157 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 PEPDP12955 493 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ZNF24P17028 368 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 HK1P19367 917 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FUT4P22083 530 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 COL8A1P27658 744 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 CLK3P49761 638 aaKnown RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 PNLIPRP2P54317 469 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 PSMD4P55036 377 aaKnown RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 TPD52P55327 224 aaPredicted RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 KCNJ10P78508 379 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 MS4A2Q01362 244 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ALDH6A1Q02252 535 aaKnown RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 SRYQ05066 204 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FOXO1Q12778 655 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 KLRB1Q12918 225 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FOXF1Q12946 379 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FADDQ13158 208 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 DUSP7Q16829 419 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.91□□□□□ -1.62
PROM1-211ENST00000511153 ZNF630Q2M218 657 aaPredicted RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 KLHL26Q53HC5 615 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 SOWAHCQ53LP3 525 aaPredicted RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 CYBRD1Q53TN4 286 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 COQ5Q5HYK3 327 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FNDC7Q5VTL7 733 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 RAET1LQ5VY80 246 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 FAM91A1Q658Y4 838 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 GLYATQ6IB77 296 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 IGFL2Q6UWQ7 119 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ENPP6Q6UWR7 440 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 HACD2Q6Y1H2 254 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 LRRC74BQ6ZQY2 392 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 Q6ZS92 163 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 NCCRP1Q6ZVX7 275 aaPredicted RBP4.91□□□□□ -1.62
PROM1-211ENST00000511153 SERPINA11Q86U17 422 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 ARMC8Q8IUR7 673 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 PEX5LQ8IYB4 626 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 UBQLNLQ8IYU4 475 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 SLC15A4Q8N697 577 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 TMEM178AQ8NBL3 297 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 C17orf47Q8NEP4 570 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 OR2M3Q8NG83 312 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 GPR32P1Q8NGA4 272 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms