RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
KDM3B-206ENST00000509468 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 TMEM109Q9BVC6 243 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 TMEM185BQ9H7F4 350 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 CXorf36Q9H7Y0 433 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-206ENST00000509468 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
KDM3B-206ENST00000509468 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 ICAM5Q9UMF0 924 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 MTORP42345 2549 aa11.29□□□□□ -0.6
KDM3B-206ENST00000509468 ZNF264O43296 627 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 KLF4O43474 513 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 TMCC2O75069 709 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 SKAP2O75563 359 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-206ENST00000509468 AK1P00568 194 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 THBDP07204 575 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 G6PDP11413 515 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 MATN1P21941 496 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 CCKARP32238 428 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 VSNL1P62760 191 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 HBA1P69905 142 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 TMEM176BQ3YBM2 270 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-206ENST00000509468 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 C6orf120Q7Z4R8 191 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 SLC43A2Q8N370 569 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 KRTCAP2Q8N6L1 136 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 OR5W2Q8NH69 310 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 ROBO4Q8WZ75 1007 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 OR7D2Q96RA2 312 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 SDF2Q99470 211 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 TACO1Q9BSH4 297 aaKnown RBP11.28□□□□□ -0.6
KDM3B-206ENST00000509468 ACTR6Q9GZN1 396 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 NMUR2Q9GZQ4 415 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 C12orf49Q9H741 205 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 NGBQ9NPG2 151 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-206ENST00000509468 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
KDM3B-206ENST00000509468 VPS13CQ709C8 3753 aa11.27□□□□□ -0.6
KDM3B-206ENST00000509468 NPIPB9F8W1W9 429 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 BIRC5O15392 142 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 TYROBPO43914 113 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 EFNA2O43921 213 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 STX11O75558 287 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 AGR2O95994 175 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 YES1P07947 543 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 MYZAPP0CAP1 466 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 CREB1P16220 341 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 PRKCAP17252 672 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
KDM3B-206ENST00000509468 LOXP28300 417 aaPredicted RBP11.27□□□□□ -0.61
KDM3B-206ENST00000509468 AGTR1P30556 359 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ARRB2P32121 409 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 RAC3P60763 192 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 LTBQ06643 244 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 CBFBQ13951 182 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ZNF239Q16600 458 aaKnown RBP11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ARHGAP11BQ3KRB8 267 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 SLC25A53Q5H9E4 307 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 Q5PR19 223 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 WDR93Q6P2C0 686 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 CLEC9AQ6UXN8 241 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 FCRLAQ7L513 359 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 KIRREL3Q8IZU9 778 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 RNF128Q8TEB7 428 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 AENQ8WTP8 325 aaKnown RBP11.27□□□□□ -0.61
KDM3B-206ENST00000509468 NUDT8Q8WV74 236 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 HSD17B8Q92506 261 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ARSGQ96EG1 525 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 SERINC1Q9NRX5 453 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 EXD2Q9NVH0 621 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ASIC5Q9NY37 505 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 ACANP16112 2415 aa11.27□□□□□ -0.61
KDM3B-206ENST00000509468 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.61
KDM3B-206ENST00000509468 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
KDM3B-206ENST00000509468 NPIPA5A0A0B4J1W7 369 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
KDM3B-206ENST00000509468 SERINC4A6NH21 518 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 NPIPA7E9PJI5 369 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 RNASET2O00584 256 aaKnown RBP11.26□□□□□ -0.61
KDM3B-206ENST00000509468 NTN1O95631 604 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 NPIPA8P0DM63 369 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 UBL4AP11441 157 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 SLC7A1P30825 629 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 SOAT1P35610 550 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 ETV4P43268 484 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 FOXF1Q12946 379 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 SELENBP1Q13228 472 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 P2RY6Q15077 328 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 GPR68Q15743 365 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 ZNF141Q15928 474 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.26□□□□□ -0.61
KDM3B-206ENST00000509468 SFRP5Q5T4F7 317 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 ATAD3BQ5T9A4 648 aa11.26□□□□□ -0.61
KDM3B-206ENST00000509468 ANXA8L1Q5VT79 327 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms