RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 PRICKLE2Q7Z3G6 844 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 TSPAN33Q86UF1 283 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SPAG16Q8N0X2 631 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 MUC20Q8N307 709 aaPredicted RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PAWRQ96IZ0 340 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 REEP4Q9H6H4 257 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF334Q9HCZ1 680 aaPredicted RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 AKAP7Q9P0M2 348 aaPredicted RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 TRPC4Q9UBN4 977 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PHF11Q9UIL8 331 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PLEKHA6Q9Y2H5 1048 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SLX4Q8IY92 1834 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 TRDV1A0A1B0GX56 115 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 GLOD5A6NK44 160 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 FKTNO75072 461 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 FGF1P05230 155 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 H1F0P07305 194 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SNRNP70P08621 437 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CTSHP09668 335 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 IL1RNP18510 177 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CNR1P21554 472 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CD9P21926 228 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 GRPRP30550 384 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SDHAP31040 664 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CTNNB1P35222 781 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 IRS1P35568 1242 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PSMB10P40306 273 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 STAT5AP42229 794 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 MAPK9P45984 424 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 TTPAP49638 278 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 ART1P52961 327 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 OR12D2P58182 307 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 EEF1A1P68104 462 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 MAT1AQ00266 395 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 EEF1A2Q05639 463 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PEA15Q15121 130 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 EEF1A1P5Q5VTE0 462 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 LRRC28Q86X40 367 aaPredicted RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 FAM129CQ86XR2 697 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 CMTM4Q8IZR5 234 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 LGALS14Q8TCE9 139 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 GPR148Q8TDV2 347 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SMPDL3BQ92485 455 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SLAMF9Q96A28 289 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC25A36Q96CQ1 311 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 OTUB2Q96DC9 234 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 SSX3Q99909 188 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 TRMT61BQ9BVS5 477 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 ZMAT3Q9HA38 289 aaKnown RBP6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 VPS29Q9UBQ0 182 aa6.77□□□□□ -1.33
LIMCH1-207ENST00000508466 PQLC2LA1A4F0 135 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 MPTX1A8MV57 137 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 IDSB3KWA1 339 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 F5H0A9 414 aaPredicted RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CNOT4O95628 575 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 LATS1O95835 1130 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 HIST1H2ABP04908 130 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 KLK1P06870 262 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 THP07101 528 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 FBXO45P0C2W1 286 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ACP5P13686 325 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 IDSP22304 550 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 S100PP25815 95 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GAS1P54826 345 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 RPS13P62277 151 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GUCA2AQ02747 115 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 CNTN1Q12860 1018 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ILKQ13418 452 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 C10orf120Q5SQS8 335 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GDPD4Q6W3E5 623 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 FCRLAQ7L513 359 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 HIST3H2AQ7L7L0 130 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SLC38A5Q8WUX1 472 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GEMIN6Q8WXD5 167 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 AUTS2Q8WXX7 1259 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SORCS1Q8WY21 1168 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 KCTD13Q8WZ19 329 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 HIST1H2ACQ93077 130 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TBC1D20Q96BZ9 403 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 TRMT2BQ96GJ1 504 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 C14orf144Q96I85 54 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 PDCD1LG2Q9BQ51 273 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 GGACTQ9BVM4 153 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 RPS10P5Q9NQ39 176 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 FCF1Q9Y324 198 aaKnown RBP6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 C1orf226A1L170 272 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 ANKRD66B4E2M5 251 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 LRRN3E7EW58 273 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 SYT5O00445 386 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 PTGESO14684 152 aa6.76□□□□□ -1.33
LIMCH1-207ENST00000508466 RNF13O43567 381 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms