RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 AGFG1P52594 562 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TSPAN5P62079 268 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 MEF2AQ02078 507 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 MLLT1Q03111 559 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 DPTQ07507 201 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LGALS3BPQ08380 585 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ILF3Q12906 894 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CRHR2Q13324 411 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRRC32Q14392 662 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF267Q14586 743 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM214AQ32MH5 1076 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRRC73Q5JTD7 316 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CLEC12AQ5QGZ9 265 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 C9orf64Q5T6V5 341 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 NDUFAF5Q5TEU4 345 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBC1D3GQ6DHY5 549 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC30A6Q6NXT4 461 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 NIPAL3Q6P499 406 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ARL9Q6T311 187 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KIAA1324Q6UXG2 1013 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 WASH2PQ6VEQ5 465 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 C3P1Q6ZMU1 363 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM91Q6ZNR0 172 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SHFQ7M4L6 423 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRSS42Q7Z5A4 293 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KCTD20Q7Z5Y7 419 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PXKQ7Z7A4 578 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KIAA0907Q7Z7F0 614 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPAT4Q86UL3 456 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 AMZ2Q86W34 360 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CPOQ8IVL8 374 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SIAH3Q8IW03 269 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PM20D2Q8IYS1 436 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR135Q8IZ08 494 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC39A11Q8N1S5 342 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SYS1Q8N2H4 156 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LNX2Q8N448 690 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LILRA3Q8N6C8 439 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 POMGNT2Q8NAT1 580 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF527Q8NB42 609 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TP53I13Q8NBR0 393 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM98AQ8NCA5 519 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMIEQ8NEW7 156 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR10H4Q8NGA5 316 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR51G2Q8NGK0 314 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5D16Q8NGK9 328 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2T35Q8NGX2 323 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR4Q3Q8NH05 313 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5K2Q8NHB8 316 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ABHD4Q8TB40 342 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FANK1Q8TC84 345 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ADAMTS15Q8TE58 950 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GANCQ8TET4 914 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GIMAP1Q8WWP7 306 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SORCS1Q8WY21 1168 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TFGQ92734 400 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 YIPF5Q969M3 257 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 VOPP1Q96AW1 172 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CLIP3Q96DZ5 547 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LCORQ96JN0 433 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 HS6ST2Q96MM7 605 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CD180Q99467 661 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 MCHR1Q99705 422 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPA33Q99795 319 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF649Q9BS31 505 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 DPH7Q9BTV6 452 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SORBS1Q9BX66 1292 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACTRT3Q9BYD9 372 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZDHHC5Q9C0B5 715 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR52A5Q9H2C5 316 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC6A15Q9H2J7 730 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 UBQLN3Q9H347 655 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 HEXA-AS1Q9H8Q6 139 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 MTHFD2LQ9H903 347 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KCNK12Q9HB15 430 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLEKHA1Q9HB21 404 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KLHL1Q9NR64 748 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 HAO2Q9NYQ3 351 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CNIH4Q9P003 139 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPS6KB2Q9UBS0 482 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TAC3Q9UHF0 121 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FBXL3Q9UKT7 428 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 POMT2Q9UKY4 750 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACSL5Q9ULC5 683 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SPATA2Q9UM82 520 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SH2B3Q9UQQ2 575 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF780BQ9Y6R6 833 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 THSD7BQ9C0I4 1608 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 EP400Q96L91 3159 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPS10-NUDT3A0A1W2PQS6 291 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 UBE2QL1A1L167 161 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRAMEF27A3QJZ7 478 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 TRABD2BA6NFA1 517 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 SNRPGP15A8MWD9 76 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 GABARAPH6UMI1 98 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 L7N2F9 121 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 RTCAO00442 366 aaKnown RBP4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF593O00488 134 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms