RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CHD3Q12873 2000 aaKnown RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 CLOCKO15516 846 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 CD3EP07766 207 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 YES1P07947 543 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 FGF4P08620 206 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 SHC1P29353 583 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 CCT3P49368 545 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 P2RX1P51575 399 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF844Q08AG5 666 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 CAPRIN1Q14444 709 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 TMEM176BQ3YBM2 270 aaPredicted RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 EXOSC6Q5RKV6 272 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ADAM5Q6NVV9 412 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 CDC73Q6P1J9 531 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 FCRLAQ7L513 359 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 NUFIP2Q7Z417 695 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 GSPT2Q8IYD1 628 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 C4orf33Q8N1A6 199 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 GABRG1Q8N1C3 465 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 RAB3IL1Q8TBN0 382 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 TWIST2Q8WVJ9 160 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 FBXW5Q969U6 566 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 TRMT61AQ96FX7 289 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 MDFIQ99750 246 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ACTRT3Q9BYD9 372 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 SRXN1Q9BYN0 137 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ATP6V1HQ9UI12 483 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 FAF1Q9UNN5 650 aaPredicted RBP12.96□□□□□ -0.33
SEC24D-208ENST00000506622 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 TRAF6Q9Y4K3 522 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 ACTL7BQ9Y614 415 aa12.96□□□□□ -0.33
SEC24D-208ENST00000506622 SCAMP2O15127 329 aaKnown RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 EFNA2O43921 213 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 GCM2O75603 506 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 NTN1O95631 604 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 KRT16P08779 473 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 SLC7A1P30825 629 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 RNF144AP50876 292 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 SUMO3P55854 103 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 TNK1Q13470 666 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 TP53BP2Q13625 1128 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 PCLAFQ15004 111 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 P2RY6Q15077 328 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 TSC22D1Q15714 1073 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 ETFDHQ16134 617 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 LSM12Q3MHD2 195 aaKnown RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 SPDYE7PQ495Y7 208 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 KLHL26Q53HC5 615 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 DCST2Q5T1A1 773 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 CBLN3Q6UW01 205 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 TFAP2EQ6VUC0 442 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 NATD1Q8N6N6 113 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 ZNF614Q8N883 585 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 OR7A2PQ8NGA2 310 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 OR5P2Q8WZ92 322 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 KISS1RQ969F8 398 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
SEC24D-208ENST00000506622 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 PPP3R2Q96LZ3 170 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 ATAD3AQ9NVI7 634 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 ICAM5Q9UMF0 924 aa12.95□□□□□ -0.34
SEC24D-208ENST00000506622 NPIPA5A0A0B4J1W7 369 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 TMEM233B4DJY2 109 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 NPIPA7E9PJI5 369 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 PIP5K1BO14986 540 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 PEX11AO75192 247 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 ADAP00813 363 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 FESP07332 822 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 NPIPA8P0DM63 369 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 LAMP1P11279 417 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 NID1P14543 1247 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 IDUAP35475 653 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 ATP12AP54707 1039 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 ITGADQ13349 1161 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 VEZF1Q14119 521 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 TAB1Q15750 504 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 NCMAPQ5T1S8 102 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 ZNF619Q8N2I2 560 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 EIF1ADQ8N9N8 165 aaKnown RBP12.94□□□□□ -0.34
SEC24D-208ENST00000506622 RFWD2Q8NHY2 731 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 GPR119Q8TDV5 335 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 EPS8L3Q8TE67 593 aaKnown RBP12.94□□□□□ -0.34
SEC24D-208ENST00000506622 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 SMAP2Q8WU79 429 aaPredicted RBP12.94□□□□□ -0.34
SEC24D-208ENST00000506622 MRGPRX4Q96LA9 322 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 PRPF18Q99633 342 aaKnown RBP12.94□□□□□ -0.34
SEC24D-208ENST00000506622 L2HGDHQ9H9P8 463 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 KLHL9Q9P2J3 617 aa12.94□□□□□ -0.34
SEC24D-208ENST00000506622 CFLARO15519 480 aa12.93□□□□□ -0.34
SEC24D-208ENST00000506622 OIP5O43482 229 aa12.93□□□□□ -0.34
SEC24D-208ENST00000506622 NPHS1O60500 1241 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms