RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 RGS19P49795 217 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ERV3-1Q14264 604 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 ALG10BQ5I7T1 473 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 PRPF38BQ5VTL8 546 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 LINC00114Q6XXX2 140 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SHISA5Q8N114 240 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 DAZLQ92904 295 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SENP5Q96HI0 755 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 COQ7Q99807 217 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 DPH1Q9BZG8 443 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR51E2Q9H255 320 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 MKKSQ9NPJ1 570 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 UBQLN4Q9NRR5 601 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 INPP5EQ9NRR6 644 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 TBCCD1Q9NVR7 557 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 TAS2R16Q9NYV7 291 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 SIGLEC7Q9Y286 467 aa15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 TMEM184BQ9Y519 407 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-204ENST00000505676 TAF4O00268 1085 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 BHLHE40O14503 412 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 IL33O95760 270 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CSTAP01040 98 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CLPSP04118 112 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CD40LGP29965 261 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 BNC1Q01954 994 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 PLAURQ03405 335 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 ACSM1Q08AH1 577 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 SSX1Q16384 188 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 WDR88Q6ZMY6 472 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 TMEM151BQ8IW70 566 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 MINDY2Q8NBR6 621 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 PPP1R14BQ96C90 147 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CHCHD6Q9BRQ6 235 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CAPN10Q9HC96 672 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 CMC2Q9NRP2 79 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 SSR3Q9UNL2 185 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 PEX16Q9Y5Y5 336 aa15.93■□□□□ 0.14
TRAPPC11-204ENST00000505676 LOC100506127A0A0U1RQW1 187 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR6C76A6NM76 312 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 FOXD2O60548 495 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 IGHA1P01876 353 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 DCNP07585 359 aaKnown RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 ADRA2AP08913 450 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 MAKP20794 623 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 EPHA8P29322 1005 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC6A6P31641 620 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 RFX3P48380 749 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC37A1P57057 533 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 ACY1Q03154 408 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 KLHL26Q53HC5 615 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 RTL4Q6ZR62 310 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 CXXC5Q7LFL8 322 aaKnown RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 FAM71CQ8NEG0 241 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR52N1Q8NH53 320 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR1L3Q8NH93 324 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 PTPMT1Q8WUK0 201 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 CLCA3PQ9Y6N3 262 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 TCRBV16S1A1N1A0A5B0 115 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 SAGE2PA6NJ88 616 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 SAGP10523 405 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 TBXA2RP21731 343 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 S100A5P33763 92 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 TPBGQ13641 420 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 NR0B2Q15466 257 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 CLPPQ16740 277 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 ARHGAP11AQ6P4F7 1023 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 TMEM71Q6P5X7 295 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 LAPTM4BQ86VI4 370 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 OR4N2Q8NGD1 307 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 PFN4Q8NHR9 129 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 RNF217Q8TC41 542 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 FLRT3Q9NZU0 649 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 CRNNQ9UBG3 495 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 CLEC2DQ9UHP7 191 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 DTX4Q9Y2E6 619 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 PMF1-BGLAPU3KQ54 211 aa15.92■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC22A31A6NKX4 558 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 HRKO00198 91 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 IFNGP01579 166 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 IGKV3-11P04433 115 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 HBQ1P09105 142 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 PNMTP11086 282 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 PAICSP22234 425 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 ALAS2P22557 587 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 CSF2RBP32927 897 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 SEPHS1P49903 392 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 BDH1Q02338 343 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 CFHR1Q03591 330 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 PMS2CLQ68D20 193 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 BCDIN3DQ7Z5W3 292 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 METTL27Q8N6F8 245 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 SLC2A12Q8TD20 617 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 LCORQ96JN0 433 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 YIPF2Q9BWQ6 316 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 OCEL1Q9H607 264 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 C12orf10Q9HB07 376 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 ICAM5Q9UMF0 924 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 TP53BP1Q12888 1972 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 A0A075B6Q4 140 aa15.91■□□□□ 0.14
TRAPPC11-204ENST00000505676 PNMA8CA0A1B0GUJ8 204 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms