RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SOX6P35712 828 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 RPL3P39023 403 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PGDP52209 483 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FGL1Q08830 312 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ASAH1Q13510 395 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 HEPACAMQ14CZ8 416 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PPA1Q15181 289 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 QPRTQ15274 297 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 IRF4Q15306 451 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MLF2Q15773 248 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 COL28A1Q2UY09 1125 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF750Q32MQ0 723 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ACER2Q5QJU3 275 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TANGO2Q6ICL3 276 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FRMPD2BQ6IN97 320 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF770Q6IQ21 691 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PLET1Q6UQ28 207 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TMPRSS11AQ6ZMR5 421 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 RTL4Q6ZR62 310 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PTCHD4Q6ZW05 846 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF765Q7L2R6 523 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 UBE3DQ7Z6J8 389 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MEX3DQ86XN8 651 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AVL9Q8NBF6 648 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 WDR36Q8NI36 951 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SLC7A13Q8TCU3 470 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 APOBEC4Q8WW27 367 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MTERF3Q96E29 417 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 NEURL3Q96EH8 262 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 C12orf66Q96MD2 445 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CMSS1Q9BQ75 279 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AIF1LQ9BQI0 150 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CRB3Q9BUF7 120 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 GSX2Q9BZM3 304 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AICDAQ9GZX7 198 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SYNPO2LQ9H987 977 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PRMT8Q9NR22 394 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ICKQ9UPZ9 632 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TEX13CA0A0J9YWL9 993 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 C4orf51C9J302 202 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MYL12BO14950 172 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PLA2G10O15496 165 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 GP1BAP07359 652 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 C8orf89P0DMQ9 161 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MYL12AP19105 171 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 G0S2P27469 103 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MAT2AP31153 395 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 GJA4P35212 333 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 RGS6P49758 472 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CCR8P51685 355 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 HMGA2P52926 109 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CRISP1P54107 249 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PCBP4P57723 403 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TAS2R60P59551 318 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CDC42P60953 191 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 RRAS2P62070 204 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 KLHL26Q53HC5 615 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PYDC2Q56P42 97 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MANEAQ5SRI9 462 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SLC35F1Q5T1Q4 408 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AGBL4Q5VU57 503 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AADACL4Q5VUY2 407 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SAXO2Q658L1 398 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF793Q6ZN11 406 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SLC46A3Q7Z3Q1 461 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 NUDT13Q86X67 352 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SLC43A2Q8N370 569 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF784Q8NCA9 323 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 DENND6BQ8NEG7 585 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PHOSPHO1Q8TCT1 267 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SMPDL3AQ92484 453 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SMARCD2Q92925 531 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PEX11GQ96HA9 241 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 C10orf90Q96M02 699 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 INSM2Q96T92 566 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 DPYSL5Q9BPU6 564 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PRR14Q9BWN1 585 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 MND1Q9BWT6 205 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SRRQ9GZT4 340 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 RIMS4Q9H426 269 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 KLHL31Q9H511 634 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FZD3Q9NPG1 666 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 ZCCHC3Q9NUD5 404 aaKnown RBP4.82□□□□□ -1.64
CLDND1-208ENST00000503004 PLCXD1Q9NUJ7 323 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 AHSPQ9NZD4 102 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 DNAJC27Q9NZQ0 273 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 TRPC4Q9UBN4 977 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 SEC14L3Q9UDX4 400 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 CLEC2DQ9UHP7 191 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FBXL2Q9UKC9 423 aa4.82□□□□□ -1.64
CLDND1-208ENST00000503004 FRYLO94915 3013 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 ZAR1LA6NP61 321 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms