RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 FOLH1BQ9HBA9 442 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 Q9N2J8 555 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 HINT3Q9NQE9 182 aaKnown RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 CMC2Q9NRP2 79 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 WSB2Q9NYS7 404 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 PCDHGB2Q9Y5G2 931 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 A0A0B4J2E0 115 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 A0A1B0GX12 115 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 B4DGG1 531 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CHURC1-FNTBB4DL54 471 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 WWP2O00308 870 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 PEX12O00623 359 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 BHLHE40O14503 412 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 PLD2O14939 933 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 SNPHO15079 494 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 AQP9O43315 295 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 ZNF749O43361 778 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 DNAJB6O75190 326 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 LYPD3O95274 346 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 NSA2O95478 260 aaKnown RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 SLC6A6P31641 620 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 GALNSP34059 522 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CAPZBP47756 277 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 IGLV3-21P80748 117 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 SCN1BQ07699 218 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CBX3Q13185 183 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 FAM53BQ14153 422 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 MZT2AQ6P582 158 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 METAP1DQ6UB28 335 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 AKAP14Q86UN6 197 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 ARHGEF39Q8N4T4 335 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 LSMEM1Q8N8F7 131 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 OR4C6Q8NH72 309 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 RBM18Q96H35 190 aaKnown RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 DGAT2Q96PD7 388 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
NUP54-202ENST00000502850 GPR174Q9BXC1 333 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 PCED1AQ9H1Q7 454 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 TRIM36Q9NQ86 728 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 TMEM74BQ9NUR3 256 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 QPCTLQ9NXS2 382 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 EPHA6Q9UF33 1036 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 SLC35A3Q9Y2D2 325 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CSNK1G3Q9Y6M4 447 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 V9GYH0 126 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 ZDBF2Q9HCK1 2354 aa11.09□□□□□ -0.63
NUP54-202ENST00000502850 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 J3QRE1 110 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 CASKO14936 926 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 APOL3O95236 402 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 CT62P0C5K7 136 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 GKN3PP0CG01 181 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 PRG2P13727 222 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 TYRP1P17643 537 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 GPR143P51810 404 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 NHLH1Q02575 133 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 ZNF141Q15928 474 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 TCTE1Q5JU00 501 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.08□□□□□ -0.64
NUP54-202ENST00000502850 CCBE1Q6UXH8 406 aaPredicted RBP11.08□□□□□ -0.64
NUP54-202ENST00000502850 LHFPL3Q86UP9 236 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 LAX1Q8IWV1 398 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 TMEFF1Q8IYR6 380 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 SIMC1Q8NDZ2 872 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 ATP6V1C2Q8NEY4 427 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 TSTD1Q8NFU3 115 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 OR9A4Q8NGU2 314 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 PRRX2Q99811 253 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 LRRC61Q9BV99 259 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 SRRQ9GZT4 340 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 CHRNA10Q9GZZ6 450 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 PRTFDC1Q9NRG1 225 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 RPS6KB2Q9UBS0 482 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 PRODH2Q9UF12 536 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 KCNE5Q9UJ90 142 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 ITGB1BP2Q9UKP3 347 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
NUP54-202ENST00000502850 GXYLT2A0PJZ3 443 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 EFCAB7A8K855 629 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PPM1BO75688 479 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 RGS9O75916 674 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 PDGFBP01127 241 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 PROS1P07225 676 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 CELA2BP08218 269 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 ZGLP1P0C6A0 271 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 MSL3P1P0C860 447 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 HK1P19367 917 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 MAKP20794 623 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 TBXA2RP21731 343 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms